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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232472
CEQI01063812
400818
Bacteroidota
TTC
Glu
>WENV170232227
CEQI01037903
281538
Bacteroidota
GAA
Phe
>WENV170232656
CEQI01086762
281538
Bacteroidota
GAA
Phe
>WENV170232759
CEQI01097893
281538
Bacteroidota
GAA
Phe
>WENV170232226
CEQI01037856
281190
Bacteroidota
CAT
Met
>WENV170231971
CEQI01009698
402171
Bacteroidota
TTC
Glu
>WENV170232151
CEQI01029240
197494
Bacteroidota
GTC
Asp
>WENV170232762
CEQI01098047
121312
Bacteroidota
TAG
Leu
>WENV170232202
CEQI01034944
117928
Bacteroidota
GTA
Tyr
>WENV170233010
CEQI01194530
186849
Bacteroidota
TCT
Arg
>WENV170232115
CEQI01024779
182234
Bacteroidota
TGT
Thr
>WENV170232547
CEQI01072152
156424
Bacteroidota
TGG
Pro
>WENV170232122
CEQI01025160
399343
Bacteroidota
TTC
Glu
>WENV170232940
CEQI01163275
156340
Bacteroidota
GGG
Pro
>WENV170232838
CEQI01104059
200441
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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