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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170238025
CEQM01109045
400818
Bacteroidota
TTC
Glu
>WENV170237365
CEQM01048664
198599
Bacteroidota
GTG
His
>WENV170236644
CEQM01002129
155808
Bacteroidota
TGG
Pro
>WENV170238080
CEQM01115292
21789
Bacteroidota
GGA
Ser
>WENV170236854
CEQM01014605
121312
Bacteroidota
TAG
Leu
>WENV170236672
CEQM01003543
193718
Bacteroidota
GTC
Asp
>WENV170237787
CEQM01083165
284409
Bacteroidota
CAT
Met
>WENV170236936
CEQM01021149
182234
Bacteroidota
TGT
Thr
>WENV170238000
CEQM01107171
296664
Bacteroidota
GAA
Phe
>WENV170238210
CEQM01124136
179598
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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