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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170245388
CEQP01091523
134456
Bacteroidota
TAG
Leu
>WENV170246560
CEQP01248516
131817
Bacteroidota
TAG
Leu
>WENV170245951
CEQP01140075
364431
Bacteroidota
TCC
Gly
>WENV170246535
CEQP01236384
287319
Bacteroidota
TTT
Lys
>WENV170245145
CEQP01072052
240785
Bacteroidota
GTC
Asp
>WENV170244302
CEQP01013791
130793
Bacteroidota
TAG
Leu
>WENV170244269
CEQP01011746
402171
Bacteroidota
TTC
Glu
>WENV170245348
CEQP01088760
155808
Bacteroidota
TGG
Pro
>WENV170244308
CEQP01014120
121312
Bacteroidota
TAG
Leu
>WENV170244692
CEQP01039355
121312
Bacteroidota
TAG
Leu
>WENV170245410
CEQP01093113
235895
Bacteroidota
GTT
Asn
>WENV170244869
CEQP01050234
193718
Bacteroidota
GTC
Asp
>WENV170246584
CEQP01257204
200516
Bacteroidota
CAT
Met
>WENV170245910
CEQP01135852
372845
Bacteroidota
CCA
Trp
>WENV170246107
CEQP01149519
372845
Bacteroidota
CCA
Trp
>WENV170245935
CEQP01138990
56162
Bacteroidota
TGA
Ser
>WENV170244257
CEQP01011155
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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