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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170251621
CEQT01120800
209752
Bacteroidota
GGC
Ala
>WENV170252186
CEQT01256807
179596
Bacteroidota
GGG
Pro
>WENV170251417
CEQT01095985
336507
Bacteroidota
TCC
Gly
>WENV170251418
CEQT01096097
336507
Bacteroidota
TCC
Gly
>WENV170251401
CEQT01093284
155808
Bacteroidota
TGG
Pro
>WENV170251982
CEQT01183291
229336
Bacteroidota
GGC
Ala
>WENV170252184
CEQT01256534
121312
Bacteroidota
TAG
Leu
>WENV170250720
CEQT01012541
193718
Bacteroidota
GTC
Asp
>WENV170250763
CEQT01017312
181598
Bacteroidota
GTT
Asn
>WENV170250821
CEQT01023876
181598
Bacteroidota
GTT
Asn
>WENV170252000
CEQT01188822
200485
Bacteroidota
CAT
Met
>WENV170251406
CEQT01094244
24958
Bacteroidota
GGA
Ser
>WENV170252253
CEQT01275137
74874
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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