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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170255536
CEQX01003340
400818
Bacteroidota
TTC
Glu
>WENV170256511
CEQX01097180
400818
Bacteroidota
TTC
Glu
>WENV170256711
CEQX01120631
288475
Bacteroidota
GCC
Gly
>WENV170256232
CEQX01063315
281538
Bacteroidota
GAA
Phe
>WENV170256282
CEQX01068140
156605
Bacteroidota
GAC
Val
>WENV170256493
CEQX01094709
156605
Bacteroidota
GAC
Val
>WENV170256682
CEQX01117299
240785
Bacteroidota
GTC
Asp
>WENV170255982
CEQX01039665
130793
Bacteroidota
TAG
Leu
>WENV170256620
CEQX01110915
130793
Bacteroidota
TAG
Leu
>WENV170256376
CEQX01080598
155808
Bacteroidota
TGG
Pro
>WENV170256651
CEQX01114536
21789
Bacteroidota
GGA
Ser
>WENV170256441
CEQX01088316
284239
Bacteroidota
TTT
Lys
>WENV170255578
CEQX01006413
227539
Bacteroidota
GTT
Asn
>WENV170256367
CEQX01079636
227539
Bacteroidota
GTT
Asn
>WENV170256321
CEQX01074086
235895
Bacteroidota
GTT
Asn
>WENV170255986
CEQX01039726
299065
Bacteroidota
TTG
Gln
>WENV170256956
CEQX01145711
231584
Bacteroidota
TCT
Arg
>WENV170255530
CEQX01003312
347386
Bacteroidota
CCA
Trp
>WENV170255617
CEQX01010116
347386
Bacteroidota
CCA
Trp
>WENV170256056
CEQX01047631
347386
Bacteroidota
CCA
Trp
>WENV170256068
CEQX01048855
347386
Bacteroidota
CCA
Trp
>WENV170256773
CEQX01127941
347386
Bacteroidota
CCA
Trp
>WENV170256932
CEQX01143972
284409
Bacteroidota
CAT
Met
>WENV170256315
CEQX01072414
284409
Bacteroidota
CAT
Met
>WENV170257235
CEQX01195966
200485
Bacteroidota
CAT
Met
>WENV170256256
CEQX01065743
156424
Bacteroidota
TGG
Pro
>WENV170255966
CEQX01038225
56162
Bacteroidota
TGA
Ser
>WENV170256073
CEQX01049521
299085
Bacteroidota
TTT
Lys
>WENV170256709
CEQX01120244
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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