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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170274429
CERM01017212
402532
Bacteroidota
GCC
Gly
>WENV170275146
CERM01068632
285360
Bacteroidota
TTT
Lys
>WENV170274605
CERM01028849
400818
Bacteroidota
TTC
Glu
>WENV170274430
CERM01017212
73133
Bacteroidota
TAA
Leu
>WENV170275169
CERM01070391
281538
Bacteroidota
GAA
Phe
>WENV170274238
CERM01005789
120026
Bacteroidota
GTA
Tyr
>WENV170274389
CERM01013996
120026
Bacteroidota
GTA
Tyr
>WENV170274411
CERM01015868
402090
Bacteroidota
TTG
Gln
>WENV170274326
CERM01010390
372872
Bacteroidota
TCC
Gly
>WENV170274244
CERM01005871
365088
Bacteroidota
TCC
Gly
>WENV170274553
CERM01024463
365088
Bacteroidota
TCC
Gly
>WENV170274559
CERM01025079
282369
Bacteroidota
TTT
Lys
>WENV170274569
CERM01025810
155786
Bacteroidota
TGG
Pro
>WENV170275015
CERM01058762
402171
Bacteroidota
TTC
Glu
>WENV170274311
CERM01009876
155808
Bacteroidota
TGG
Pro
>WENV170274764
CERM01039689
155808
Bacteroidota
TGG
Pro
>WENV170274421
CERM01016647
176812
Bacteroidota
TCT
Arg
>WENV170275291
CERM01078223
176812
Bacteroidota
TCT
Arg
>WENV170275066
CERM01062931
366169
Bacteroidota
GAA
Phe
>WENV170275985
CERM01240448
447465
Bacteroidota
CCT
Arg
>WENV170274334
CERM01010788
197494
Bacteroidota
GTC
Asp
>WENV170275220
CERM01074425
197494
Bacteroidota
GTC
Asp
>WENV170274750
CERM01039281
227539
Bacteroidota
GTT
Asn
>WENV170274621
CERM01030019
235895
Bacteroidota
GTT
Asn
>WENV170274337
CERM01010866
156596
Bacteroidota
TAC
Val
>WENV170274362
CERM01012379
172063
Bacteroidota
TAC
Val
>WENV170274618
CERM01029821
193718
Bacteroidota
GTC
Asp
>WENV170274689
CERM01035437
193718
Bacteroidota
GTC
Asp
>WENV170275092
CERM01064752
193718
Bacteroidota
GTC
Asp
>WENV170274259
CERM01006499
117928
Bacteroidota
GTA
Tyr
>WENV170274243
CERM01005871
200516
Bacteroidota
CAT
Met
>WENV170274279
CERM01008342
206043
Bacteroidota
GTC
Asp
>WENV170274552
CERM01024463
118749
Bacteroidota
GTA
Tyr
>WENV170274703
CERM01035933
372845
Bacteroidota
CCA
Trp
>WENV170275095
CERM01064992
372845
Bacteroidota
CCA
Trp
>WENV170275130
CERM01067767
118418
Bacteroidota
TAG
Leu
>WENV170274240
CERM01005789
399898
Bacteroidota
GGT
Thr
>WENV170274123
CERM01000312
379077
Bacteroidota
TTT
Lys
>WENV170274745
CERM01038830
379077
Bacteroidota
TTT
Lys
>WENV170274181
CERM01003116
233847
Bacteroidota
TGC
Ala
>WENV170274277
CERM01008099
24958
Bacteroidota
GGA
Ser
>WENV170274329
CERM01010477
403841
Bacteroidota
GCC
Gly
>WENV170275383
CERM01081030
296664
Bacteroidota
GAA
Phe
>WENV170275187
CERM01071438
186597
Bacteroidota
GTG
His
>WENV170274248
CERM01005971
156424
Bacteroidota
TGG
Pro
>WENV170274688
CERM01035413
399343
Bacteroidota
TTC
Glu
>WENV170275294
CERM01078461
399343
Bacteroidota
TTC
Glu
>WENV170274742
CERM01038696
156340
Bacteroidota
GGG
Pro
>WENV170274765
CERM01039758
156340
Bacteroidota
GGG
Pro
>WENV170274385
CERM01013769
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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