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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170277596
CERQ01004397
193675
Bacteroidota
CAT
Met
>WENV170277625
CERQ01006955
400818
Bacteroidota
TTC
Glu
>WENV170279120
CERQ01242405
198599
Bacteroidota
GTG
His
>WENV170277972
CERQ01041854
222068
Bacteroidota
GAT
Ile
>WENV170277826
CERQ01027757
156605
Bacteroidota
GAC
Val
>WENV170278411
CERQ01090051
281190
Bacteroidota
CAT
Met
>WENV170278033
CERQ01047232
240785
Bacteroidota
GTC
Asp
>WENV170278620
CERQ01117251
282369
Bacteroidota
TTT
Lys
>WENV170278398
CERQ01088596
185890
Bacteroidota
TGC
Ala
>WENV170278422
CERQ01092401
21789
Bacteroidota
GGA
Ser
>WENV170278361
CERQ01083362
235895
Bacteroidota
GTT
Asn
>WENV170277712
CERQ01015874
299065
Bacteroidota
TTG
Gln
>WENV170277733
CERQ01017802
299065
Bacteroidota
TTG
Gln
>WENV170278308
CERQ01077335
299032
Bacteroidota
GCC
Gly
>WENV170278508
CERQ01104387
231584
Bacteroidota
TCT
Arg
>WENV170279123
CERQ01242971
401036
Bacteroidota
CCT
Arg
>WENV170277938
CERQ01038981
408604
Bacteroidota
GGT
Thr
>WENV170277594
CERQ01004242
356216
Bacteroidota
TTT
Lys
>WENV170278352
CERQ01082887
179598
Bacteroidota
CAT
Met
>WENV170277581
CERQ01003152
399343
Bacteroidota
TTC
Glu
>WENV170277582
CERQ01003152
399343
Bacteroidota
TTC
Glu
>WENV170278622
CERQ01117521
56162
Bacteroidota
TGA
Ser
>WENV170278543
CERQ01108898
299085
Bacteroidota
TTT
Lys
>WENV170277917
CERQ01036732
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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