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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170284337
CERV01038606
400818
Bacteroidota
TTC
Glu
>WENV170285134
CERV01123597
281538
Bacteroidota
GAA
Phe
>WENV170284983
CERV01109779
156605
Bacteroidota
GAC
Val
>WENV170284007
CERV01013671
240785
Bacteroidota
GTC
Asp
>WENV170284847
CERV01092583
240785
Bacteroidota
GTC
Asp
>WENV170285221
CERV01130663
305664
Bacteroidota
CAT
Met
>WENV170284961
CERV01105863
209351
Bacteroidota
CAT
Met
>WENV170283864
CERV01004745
130793
Bacteroidota
TAG
Leu
>WENV170284830
CERV01091218
130793
Bacteroidota
TAG
Leu
>WENV170285143
CERV01124277
402171
Bacteroidota
TTC
Glu
>WENV170285503
CERV01246120
121312
Bacteroidota
TAG
Leu
>WENV170285137
CERV01123679
227539
Bacteroidota
GTT
Asn
>WENV170285021
CERV01114284
235895
Bacteroidota
GTT
Asn
>WENV170283993
CERV01012885
299065
Bacteroidota
TTG
Gln
>WENV170284436
CERV01048770
286857
Bacteroidota
TTT
Lys
>WENV170284709
CERV01077098
193718
Bacteroidota
GTC
Asp
>WENV170284924
CERV01101831
231584
Bacteroidota
TCT
Arg
>WENV170284143
CERV01022222
181598
Bacteroidota
GTT
Asn
>WENV170284708
CERV01077011
347386
Bacteroidota
CCA
Trp
>WENV170284746
CERV01082030
347386
Bacteroidota
CCA
Trp
>WENV170284959
CERV01105591
347386
Bacteroidota
CCA
Trp
>WENV170283949
CERV01010183
284409
Bacteroidota
CAT
Met
>WENV170284087
CERV01019510
182234
Bacteroidota
TGT
Thr
>WENV170284247
CERV01030003
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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