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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170285714
CERW01014018
400818
Bacteroidota
TTC
Glu
>WENV170286116
CERW01054221
400818
Bacteroidota
TTC
Glu
>WENV170286825
CERW01143214
400818
Bacteroidota
TTC
Glu
>WENV170285951
CERW01038026
156605
Bacteroidota
GAC
Val
>WENV170286221
CERW01067969
240785
Bacteroidota
GTC
Asp
>WENV170286222
CERW01068181
209351
Bacteroidota
CAT
Met
>WENV170286181
CERW01061768
320669
Bacteroidota
GAA
Phe
>WENV170285963
CERW01039127
336507
Bacteroidota
TCC
Gly
>WENV170286018
CERW01042672
336507
Bacteroidota
TCC
Gly
>WENV170286546
CERW01107753
336507
Bacteroidota
TCC
Gly
>WENV170285889
CERW01032790
155808
Bacteroidota
TGG
Pro
>WENV170285937
CERW01036743
197494
Bacteroidota
GTC
Asp
>WENV170286540
CERW01107085
185890
Bacteroidota
TGC
Ala
>WENV170286276
CERW01075935
227539
Bacteroidota
GTT
Asn
>WENV170286961
CERW01211568
286857
Bacteroidota
TTT
Lys
>WENV170286048
CERW01046343
193718
Bacteroidota
GTC
Asp
>WENV170286614
CERW01118374
117927
Bacteroidota
TAG
Leu
>WENV170285817
CERW01024036
347386
Bacteroidota
CCA
Trp
>WENV170285911
CERW01034462
347386
Bacteroidota
CCA
Trp
>WENV170286187
CERW01063274
347386
Bacteroidota
CCA
Trp
>WENV170286432
CERW01091525
347386
Bacteroidota
CCA
Trp
>WENV170286468
CERW01097694
347386
Bacteroidota
CCA
Trp
>WENV170286620
CERW01119140
206043
Bacteroidota
GTC
Asp
>WENV170285891
CERW01032955
182234
Bacteroidota
TGT
Thr
>WENV170286022
CERW01043266
24958
Bacteroidota
GGA
Ser
>WENV170286389
CERW01086275
56162
Bacteroidota
TGA
Ser
>WENV170286632
CERW01121050
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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