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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170292384
CESB01047949
400818
Bacteroidota
TTC
Glu
>WENV170293261
CESB01145420
198599
Bacteroidota
GTG
His
>WENV170293034
CESB01124950
23370
Bacteroidota
GGA
Ser
>WENV170292318
CESB01041212
240785
Bacteroidota
GTC
Asp
>WENV170292484
CESB01059948
155808
Bacteroidota
TGG
Pro
>WENV170292364
CESB01046327
366169
Bacteroidota
GAA
Phe
>WENV170293254
CESB01144909
366169
Bacteroidota
GAA
Phe
>WENV170292418
CESB01052452
227539
Bacteroidota
GTT
Asn
>WENV170292543
CESB01068022
227539
Bacteroidota
GTT
Asn
>WENV170292194
CESB01030953
231584
Bacteroidota
TCT
Arg
>WENV170292273
CESB01037018
372845
Bacteroidota
CCA
Trp
>WENV170292300
CESB01039383
372845
Bacteroidota
CCA
Trp
>WENV170292805
CESB01097311
372845
Bacteroidota
CCA
Trp
>WENV170292534
CESB01067285
361792
Bacteroidota
GAA
Phe
>WENV170292605
CESB01076128
361792
Bacteroidota
GAA
Phe
>WENV170293094
CESB01131346
361792
Bacteroidota
GAA
Phe
>WENV170292017
CESB01012897
179598
Bacteroidota
CAT
Met
>WENV170292898
CESB01109159
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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