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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170296443
CESE01004303
120026
Bacteroidota
GTA
Tyr
>WENV170296533
CESE01016027
120026
Bacteroidota
GTA
Tyr
>WENV170296416
CESE01001328
402090
Bacteroidota
TTG
Gln
>WENV170297005
CESE01081679
402090
Bacteroidota
TTG
Gln
>WENV170296667
CESE01034903
281190
Bacteroidota
CAT
Met
>WENV170297262
CESE01131042
281190
Bacteroidota
CAT
Met
>WENV170296906
CESE01065686
155786
Bacteroidota
TGG
Pro
>WENV170297251
CESE01129798
155786
Bacteroidota
TGG
Pro
>WENV170296982
CESE01078416
155808
Bacteroidota
TGG
Pro
>WENV170296475
CESE01008647
177083
Bacteroidota
TGT
Thr
>WENV170297567
CESE01219772
121312
Bacteroidota
TAG
Leu
>WENV170296497
CESE01011543
178527
Bacteroidota
CAT
Met
>WENV170296582
CESE01024732
344563
Bacteroidota
TTG
Gln
>WENV170296417
CESE01001436
156596
Bacteroidota
TAC
Val
>WENV170296464
CESE01006924
347386
Bacteroidota
CCA
Trp
>WENV170297123
CESE01107095
365090
Bacteroidota
TTT
Lys
>WENV170297273
CESE01132204
365090
Bacteroidota
TTT
Lys
>WENV170296429
CESE01002393
402343
Bacteroidota
CCA
Trp
>WENV170296530
CESE01015875
402343
Bacteroidota
CCA
Trp
>WENV170296419
CESE01001474
206043
Bacteroidota
GTC
Asp
>WENV170296420
CESE01001534
206043
Bacteroidota
GTC
Asp
>WENV170296441
CESE01003684
206043
Bacteroidota
GTC
Asp
>WENV170296834
CESE01054865
118418
Bacteroidota
TAG
Leu
>WENV170296991
CESE01079348
118418
Bacteroidota
TAG
Leu
>WENV170297384
CESE01145623
118418
Bacteroidota
TAG
Leu
>WENV170296445
CESE01004303
399898
Bacteroidota
GGT
Thr
>WENV170296535
CESE01016027
399898
Bacteroidota
GGT
Thr
>WENV170297149
CESE01111707
307577
Bacteroidota
>WENV170296694
CESE01037698
289409
Bacteroidota
TCC
Gly
>WENV170297314
CESE01138679
296664
Bacteroidota
GAA
Phe
>WENV170296489
CESE01009983
176557
Bacteroidota
CAT
Met
>WENV170296598
CESE01026560
176557
Bacteroidota
CAT
Met
>WENV170296566
CESE01020736
361792
Bacteroidota
GAA
Phe
>WENV170296571
CESE01021299
361792
Bacteroidota
GAA
Phe
>WENV170297331
CESE01140376
361792
Bacteroidota
GAA
Phe
>WENV170296947
CESE01070997
481829
Bacteroidota
GCA
Cys
>WENV170296852
CESE01057058
64185
Bacteroidota
TGA
Ser
>WENV170297256
CESE01130421
437306
Bacteroidota
TTC
Glu
>WENV170296711
CESE01040558
186597
Bacteroidota
GTG
His
>WENV170297287
CESE01135068
186597
Bacteroidota
GTG
His
>WENV170296463
CESE01006884
156424
Bacteroidota
TGG
Pro
>WENV170296589
CESE01025631
156424
Bacteroidota
TGG
Pro
>WENV170296603
CESE01027222
156424
Bacteroidota
TGG
Pro
>WENV170297318
CESE01139301
399343
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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