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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318261
CESQ01026143
400818
Bacteroidota
TTC
Glu
>WENV170318320
CESQ01031933
400818
Bacteroidota
TTC
Glu
>WENV170319777
CESQ01199175
170858
Bacteroidota
TGG
Pro
>WENV170319026
CESQ01107593
156595
Bacteroidota
TGG
Pro
>WENV170319184
CESQ01125541
198599
Bacteroidota
GTG
His
>WENV170318358
CESQ01035658
364431
Bacteroidota
TCC
Gly
>WENV170318692
CESQ01071681
364431
Bacteroidota
TCC
Gly
>WENV170318649
CESQ01066960
366169
Bacteroidota
GAA
Phe
>WENV170319570
CESQ01175946
284228
Bacteroidota
CAT
Met
>WENV170318691
CESQ01071679
193718
Bacteroidota
GTC
Asp
>WENV170319100
CESQ01115965
193718
Bacteroidota
GTC
Asp
>WENV170319438
CESQ01156047
193718
Bacteroidota
GTC
Asp
>WENV170317983
CESQ01005686
181598
Bacteroidota
GTT
Asn
>WENV170318321
CESQ01031996
372845
Bacteroidota
CCA
Trp
>WENV170318981
CESQ01102924
372845
Bacteroidota
CCA
Trp
>WENV170318342
CESQ01034880
182234
Bacteroidota
TGT
Thr
>WENV170318969
CESQ01100345
361792
Bacteroidota
GAA
Phe
>WENV170319960
CESQ01216168
361792
Bacteroidota
GAA
Phe
>WENV170319917
CESQ01213350
356216
Bacteroidota
TTT
Lys
>WENV170320103
CESQ01225124
178366
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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