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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170321530
CESR01062605
155808
Bacteroidota
TGG
Pro
>WENV170321680
CESR01071097
177083
Bacteroidota
TGT
Thr
>WENV170321639
CESR01068457
227539
Bacteroidota
GTT
Asn
>WENV170322394
CESR01138545
235895
Bacteroidota
GTT
Asn
>WENV170320922
CESR01018650
299065
Bacteroidota
TTG
Gln
>WENV170321516
CESR01061653
181598
Bacteroidota
GTT
Asn
>WENV170320917
CESR01018328
347386
Bacteroidota
CCA
Trp
>WENV170321498
CESR01060543
347386
Bacteroidota
CCA
Trp
>WENV170322729
CESR01164748
284409
Bacteroidota
CAT
Met
>WENV170321007
CESR01024052
56162
Bacteroidota
TGA
Ser
>WENV170321122
CESR01033031
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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