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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170328996
CESV01065760
400818
Bacteroidota
TTC
Glu
>WENV170329100
CESV01076092
400818
Bacteroidota
TTC
Glu
>WENV170329899
CESV01172920
156595
Bacteroidota
TGG
Pro
>WENV170328902
CESV01057951
198599
Bacteroidota
GTG
His
>WENV170329322
CESV01100477
281538
Bacteroidota
GAA
Phe
>WENV170329114
CESV01078989
156605
Bacteroidota
GAC
Val
>WENV170329651
CESV01145147
156605
Bacteroidota
GAC
Val
>WENV170329360
CESV01105201
20278
Bacteroidota
GGA
Ser
>WENV170330750
CESV01372373
59487
Bacteroidota
TGA
Ser
>WENV170328614
CESV01028650
356595
Bacteroidota
TTT
Lys
>WENV170328357
CESV01007097
364431
Bacteroidota
TCC
Gly
>WENV170329041
CESV01070329
364431
Bacteroidota
TCC
Gly
>WENV170328323
CESV01004850
240785
Bacteroidota
GTC
Asp
>WENV170328739
CESV01042041
240785
Bacteroidota
GTC
Asp
>WENV170330309
CESV01193352
402171
Bacteroidota
TTC
Glu
>WENV170329712
CESV01153573
155808
Bacteroidota
TGG
Pro
>WENV170329368
CESV01106723
176812
Bacteroidota
TCT
Arg
>WENV170328534
CESV01022703
366169
Bacteroidota
GAA
Phe
>WENV170330239
CESV01191631
366169
Bacteroidota
GAA
Phe
>WENV170329125
CESV01080001
21789
Bacteroidota
GGA
Ser
>WENV170328337
CESV01005571
121312
Bacteroidota
TAG
Leu
>WENV170328543
CESV01023360
227539
Bacteroidota
GTT
Asn
>WENV170330040
CESV01183261
227539
Bacteroidota
GTT
Asn
>WENV170328492
CESV01018807
235895
Bacteroidota
GTT
Asn
>WENV170330471
CESV01304254
156596
Bacteroidota
TAC
Val
>WENV170329121
CESV01079688
338178
Bacteroidota
CAT
Met
>WENV170329963
CESV01177067
286857
Bacteroidota
TTT
Lys
>WENV170328494
CESV01019396
193718
Bacteroidota
GTC
Asp
>WENV170328919
CESV01059600
193718
Bacteroidota
GTC
Asp
>WENV170328436
CESV01014147
231584
Bacteroidota
TCT
Arg
>WENV170329305
CESV01098788
231584
Bacteroidota
TCT
Arg
>WENV170328538
CESV01022873
372845
Bacteroidota
CCA
Trp
>WENV170328742
CESV01042733
372845
Bacteroidota
CCA
Trp
>WENV170328846
CESV01052142
372845
Bacteroidota
CCA
Trp
>WENV170329280
CESV01095834
372845
Bacteroidota
CCA
Trp
>WENV170329315
CESV01099748
372845
Bacteroidota
CCA
Trp
>WENV170329316
CESV01099749
372845
Bacteroidota
CCA
Trp
>WENV170330203
CESV01191153
372845
Bacteroidota
CCA
Trp
>WENV170330308
CESV01193314
372845
Bacteroidota
CCA
Trp
>WENV170328696
CESV01036663
182234
Bacteroidota
TGT
Thr
>WENV170330538
CESV01333038
460957
Bacteroidota
GCC
Gly
>WENV170328790
CESV01046458
183480
Bacteroidota
TGC
Ala
>WENV170329258
CESV01092869
361792
Bacteroidota
GAA
Phe
>WENV170330328
CESV01193609
361792
Bacteroidota
GAA
Phe
>WENV170328723
CESV01039942
56162
Bacteroidota
TGA
Ser
>WENV170329014
CESV01067842
56162
Bacteroidota
TGA
Ser
>WENV170329848
CESV01168668
56162
Bacteroidota
TGA
Ser
>WENV170330259
CESV01192176
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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