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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170331127
CESW01029509
400818
Bacteroidota
TTC
Glu
>WENV170330934
CESW01014267
73133
Bacteroidota
TAA
Leu
>WENV170331344
CESW01050521
288475
Bacteroidota
GCC
Gly
>WENV170331339
CESW01050089
198599
Bacteroidota
GTG
His
>WENV170331128
CESW01029526
281538
Bacteroidota
GAA
Phe
>WENV170330864
CESW01007892
156605
Bacteroidota
GAC
Val
>WENV170331887
CESW01105089
305664
Bacteroidota
CAT
Met
>WENV170331218
CESW01037973
155808
Bacteroidota
TGG
Pro
>WENV170331950
CESW01112499
155808
Bacteroidota
TGG
Pro
>WENV170331962
CESW01114794
155808
Bacteroidota
TGG
Pro
>WENV170332376
CESW01148640
155808
Bacteroidota
TGG
Pro
>WENV170331659
CESW01080481
74253
Bacteroidota
GCT
Ser
>WENV170332658
CESW01251915
156596
Bacteroidota
TAC
Val
>WENV170331982
CESW01117331
299065
Bacteroidota
TTG
Gln
>WENV170331604
CESW01076113
193718
Bacteroidota
GTC
Asp
>WENV170331931
CESW01109613
21872
Bacteroidota
GGA
Ser
>WENV170330848
CESW01006540
181598
Bacteroidota
GTT
Asn
>WENV170331037
CESW01021799
181598
Bacteroidota
GTT
Asn
>WENV170331733
CESW01087033
181598
Bacteroidota
GTT
Asn
>WENV170331407
CESW01056297
284409
Bacteroidota
CAT
Met
>WENV170332201
CESW01139891
284409
Bacteroidota
CAT
Met
>WENV170330952
CESW01015305
183480
Bacteroidota
TGC
Ala
>WENV170332106
CESW01132174
192374
Bacteroidota
GAT
Ile
>WENV170330793
CESW01001730
56162
Bacteroidota
TGA
Ser
>WENV170332247
CESW01142187
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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