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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170342099
CETD01077160
400818
Bacteroidota
TTC
Glu
>WENV170342247
CETD01094901
400818
Bacteroidota
TTC
Glu
>WENV170342254
CETD01095838
400818
Bacteroidota
TTC
Glu
>WENV170342500
CETD01133215
400818
Bacteroidota
TTC
Glu
>WENV170341532
CETD01015868
222068
Bacteroidota
GAT
Ile
>WENV170342491
CETD01132082
156605
Bacteroidota
GAC
Val
>WENV170341748
CETD01036662
320669
Bacteroidota
GAA
Phe
>WENV170342351
CETD01110442
320669
Bacteroidota
GAA
Phe
>WENV170342821
CETD01181778
320669
Bacteroidota
GAA
Phe
>WENV170341825
CETD01043139
155808
Bacteroidota
TGG
Pro
>WENV170341905
CETD01050907
21789
Bacteroidota
GGA
Ser
>WENV170342672
CETD01163318
193718
Bacteroidota
GTC
Asp
>WENV170342874
CETD01186698
193718
Bacteroidota
GTC
Asp
>WENV170342313
CETD01105755
181598
Bacteroidota
GTT
Asn
>WENV170342758
CETD01175463
284409
Bacteroidota
CAT
Met
>WENV170342069
CETD01072295
183480
Bacteroidota
TGC
Ala
>WENV170342101
CETD01077232
183480
Bacteroidota
TGC
Ala
>WENV170341444
CETD01008934
296664
Bacteroidota
GAA
Phe
>WENV170342829
CETD01182524
399343
Bacteroidota
TTC
Glu
>WENV170341728
CETD01035441
56162
Bacteroidota
TGA
Ser
>WENV170342715
CETD01170432
56162
Bacteroidota
TGA
Ser
>WENV170341529
CETD01015735
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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