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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170347897
CETG01169829
400818
Bacteroidota
TTC
Glu
>WENV170348299
CETG01191239
281538
Bacteroidota
GAA
Phe
>WENV170346151
CETG01016559
222068
Bacteroidota
GAT
Ile
>WENV170348873
CETG01428021
303411
Bacteroidota
>WENV170346237
CETG01023113
305664
Bacteroidota
CAT
Met
>WENV170347664
CETG01154975
336507
Bacteroidota
TCC
Gly
>WENV170348079
CETG01181877
336507
Bacteroidota
TCC
Gly
>WENV170346906
CETG01079424
130793
Bacteroidota
TAG
Leu
>WENV170348494
CETG01294648
402171
Bacteroidota
TTC
Glu
>WENV170347388
CETG01130186
21789
Bacteroidota
GGA
Ser
>WENV170346696
CETG01059804
235895
Bacteroidota
GTT
Asn
>WENV170346307
CETG01028821
299065
Bacteroidota
TTG
Gln
>WENV170347809
CETG01163883
231584
Bacteroidota
TCT
Arg
>WENV170348181
CETG01187369
347386
Bacteroidota
CCA
Trp
>WENV170347283
CETG01119390
206043
Bacteroidota
GTC
Asp
>WENV170346016
CETG01007847
24958
Bacteroidota
GGA
Ser
>WENV170346479
CETG01043881
186597
Bacteroidota
GTG
His
>WENV170346302
CETG01028474
399343
Bacteroidota
TTC
Glu
>WENV170346303
CETG01028474
399343
Bacteroidota
TTC
Glu
>WENV170347898
CETG01169835
56162
Bacteroidota
TGA
Ser
>WENV170346581
CETG01051070
299085
Bacteroidota
TTT
Lys
>WENV170348349
CETG01191864
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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