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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170357406
CETJ01182754
281538
Bacteroidota
GAA
Phe
>WENV170357211
CETJ01126192
156605
Bacteroidota
GAC
Val
>WENV170356857
CETJ01073759
20865
Bacteroidota
GGA
Ser
>WENV170356906
CETJ01079279
240785
Bacteroidota
GTC
Asp
>WENV170356162
CETJ01009238
336507
Bacteroidota
TCC
Gly
>WENV170356277
CETJ01017897
130793
Bacteroidota
TAG
Leu
>WENV170356649
CETJ01055623
402171
Bacteroidota
TTC
Glu
>WENV170356207
CETJ01012135
155808
Bacteroidota
TGG
Pro
>WENV170356188
CETJ01011370
155808
Bacteroidota
TGG
Pro
>WENV170357334
CETJ01164010
229336
Bacteroidota
GGC
Ala
>WENV170356974
CETJ01086698
227539
Bacteroidota
GTT
Asn
>WENV170357430
CETJ01186088
155807
Bacteroidota
GAC
Val
>WENV170356749
CETJ01062842
235895
Bacteroidota
GTT
Asn
>WENV170356869
CETJ01074745
299065
Bacteroidota
TTG
Gln
>WENV170356170
CETJ01010340
347386
Bacteroidota
CCA
Trp
>WENV170356266
CETJ01016934
347386
Bacteroidota
CCA
Trp
>WENV170356829
CETJ01070808
347386
Bacteroidota
CCA
Trp
>WENV170356618
CETJ01052028
24958
Bacteroidota
GGA
Ser
>WENV170356492
CETJ01038812
299085
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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