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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170357806
CETK01026400
400818
Bacteroidota
TTC
Glu
>WENV170358615
CETK01117198
400818
Bacteroidota
TTC
Glu
>WENV170358893
CETK01150651
281538
Bacteroidota
GAA
Phe
>WENV170357780
CETK01024159
156605
Bacteroidota
GAC
Val
>WENV170358141
CETK01058222
156605
Bacteroidota
GAC
Val
>WENV170358889
CETK01150177
156605
Bacteroidota
GAC
Val
>WENV170358037
CETK01046327
356595
Bacteroidota
TTT
Lys
>WENV170357520
CETK01006356
364431
Bacteroidota
TCC
Gly
>WENV170358100
CETK01054129
364431
Bacteroidota
TCC
Gly
>WENV170359038
CETK01158041
281190
Bacteroidota
CAT
Met
>WENV170358820
CETK01143030
240785
Bacteroidota
GTC
Asp
>WENV170359056
CETK01158646
240785
Bacteroidota
GTC
Asp
>WENV170357987
CETK01040936
402171
Bacteroidota
TTC
Glu
>WENV170357706
CETK01020163
155808
Bacteroidota
TGG
Pro
>WENV170359003
CETK01156859
176812
Bacteroidota
TCT
Arg
>WENV170357517
CETK01005900
366169
Bacteroidota
GAA
Phe
>WENV170357686
CETK01018438
177083
Bacteroidota
TGT
Thr
>WENV170357659
CETK01015846
121312
Bacteroidota
TAG
Leu
>WENV170358779
CETK01139353
121312
Bacteroidota
TAG
Leu
>WENV170358632
CETK01119025
235895
Bacteroidota
GTT
Asn
>WENV170358769
CETK01138335
156596
Bacteroidota
TAC
Val
>WENV170358633
CETK01119025
193718
Bacteroidota
GTC
Asp
>WENV170358835
CETK01144630
193718
Bacteroidota
GTC
Asp
>WENV170357990
CETK01041218
231584
Bacteroidota
TCT
Arg
>WENV170357474
CETK01000953
347386
Bacteroidota
CCA
Trp
>WENV170357554
CETK01009115
347386
Bacteroidota
CCA
Trp
>WENV170358708
CETK01130161
347386
Bacteroidota
CCA
Trp
>WENV170359031
CETK01157707
347386
Bacteroidota
CCA
Trp
>WENV170357875
CETK01032247
347386
Bacteroidota
CCA
Trp
>WENV170358198
CETK01064061
347386
Bacteroidota
CCA
Trp
>WENV170358482
CETK01100421
347386
Bacteroidota
CCA
Trp
>WENV170358388
CETK01087384
183480
Bacteroidota
TGC
Ala
>WENV170358363
CETK01083591
235666
Bacteroidota
TCG
Arg
>WENV170357596
CETK01011988
361792
Bacteroidota
GAA
Phe
>WENV170358426
CETK01091303
361792
Bacteroidota
GAA
Phe
>WENV170358449
CETK01094149
156340
Bacteroidota
GGG
Pro
>WENV170359288
CETK01321365
156340
Bacteroidota
GGG
Pro
>WENV170357975
CETK01039425
56162
Bacteroidota
TGA
Ser
>WENV170358099
CETK01054075
56162
Bacteroidota
TGA
Ser
>WENV170358369
CETK01084073
56162
Bacteroidota
TGA
Ser
>WENV170358554
CETK01108495
56162
Bacteroidota
TGA
Ser
>WENV170358707
CETK01130078
56162
Bacteroidota
TGA
Ser
>WENV170358756
CETK01136146
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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