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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170360851
CETL01147223
134456
Bacteroidota
TAG
Leu
>WENV170360639
CETL01129755
400818
Bacteroidota
TTC
Glu
>WENV170360866
CETL01147557
156076
Bacteroidota
TAC
Val
>WENV170360600
CETL01124880
198599
Bacteroidota
GTG
His
>WENV170360045
CETL01059414
156605
Bacteroidota
GAC
Val
>WENV170360003
CETL01053626
364431
Bacteroidota
TCC
Gly
>WENV170360274
CETL01085629
240785
Bacteroidota
GTC
Asp
>WENV170359949
CETL01044141
229336
Bacteroidota
GGC
Ala
>WENV170360668
CETL01132836
121312
Bacteroidota
TAG
Leu
>WENV170360903
CETL01147616
299065
Bacteroidota
TTG
Gln
>WENV170359822
CETL01030639
231584
Bacteroidota
TCT
Arg
>WENV170360145
CETL01070183
372845
Bacteroidota
CCA
Trp
>WENV170360158
CETL01072835
372845
Bacteroidota
CCA
Trp
>WENV170360253
CETL01083431
372845
Bacteroidota
CCA
Trp
>WENV170360431
CETL01104579
361792
Bacteroidota
GAA
Phe
>WENV170360771
CETL01142446
361792
Bacteroidota
GAA
Phe
>WENV170359956
CETL01045074
399343
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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