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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170362980
CETM01116690
193675
Bacteroidota
CAT
Met
>WENV170362825
CETM01103220
156605
Bacteroidota
GAC
Val
>WENV170364323
CETM01213400
303411
Bacteroidota
>WENV170363580
CETM01171008
364431
Bacteroidota
TCC
Gly
>WENV170363561
CETM01169443
130793
Bacteroidota
TAG
Leu
>WENV170363154
CETM01132071
155808
Bacteroidota
TGG
Pro
>WENV170361576
CETM01014898
185890
Bacteroidota
TGC
Ala
>WENV170363023
CETM01119849
299065
Bacteroidota
TTG
Gln
>WENV170361598
CETM01016291
193718
Bacteroidota
GTC
Asp
>WENV170361681
CETM01022191
347386
Bacteroidota
CCA
Trp
>WENV170363408
CETM01157276
347386
Bacteroidota
CCA
Trp
>WENV170363909
CETM01194826
347386
Bacteroidota
CCA
Trp
>WENV170362976
CETM01116192
206043
Bacteroidota
GTC
Asp
>WENV170362027
CETM01042408
182234
Bacteroidota
TGT
Thr
>WENV170361803
CETM01028786
399343
Bacteroidota
TTC
Glu
>WENV170362622
CETM01086217
56162
Bacteroidota
TGA
Ser
>WENV170361330
CETM01002621
299085
Bacteroidota
TTT
Lys
>WENV170361730
CETM01025178
299085
Bacteroidota
TTT
Lys
>WENV170364501
CETM01311869
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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