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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170371914
CETS01049440
400818
Bacteroidota
TTC
Glu
>WENV170372336
CETS01085001
198599
Bacteroidota
GTG
His
>WENV170372801
CETS01135602
198599
Bacteroidota
GTG
His
>WENV170371413
CETS01010313
281538
Bacteroidota
GAA
Phe
>WENV170372108
CETS01065290
281538
Bacteroidota
GAA
Phe
>WENV170372221
CETS01073659
23370
Bacteroidota
GGA
Ser
>WENV170371644
CETS01027361
364431
Bacteroidota
TCC
Gly
>WENV170373027
CETS01158245
155808
Bacteroidota
TGG
Pro
>WENV170371455
CETS01012580
235895
Bacteroidota
GTT
Asn
>WENV170372497
CETS01103138
235895
Bacteroidota
GTT
Asn
>WENV170372832
CETS01139038
299065
Bacteroidota
TTG
Gln
>WENV170372963
CETS01151276
299065
Bacteroidota
TTG
Gln
>WENV170372649
CETS01119948
299032
Bacteroidota
GCC
Gly
>WENV170372513
CETS01104901
215303
Bacteroidota
GTC
Asp
>WENV170372193
CETS01071125
284409
Bacteroidota
CAT
Met
>WENV170371569
CETS01021092
206043
Bacteroidota
GTC
Asp
>WENV170371611
CETS01024511
372845
Bacteroidota
CCA
Trp
>WENV170373018
CETS01157394
372845
Bacteroidota
CCA
Trp
>WENV170372769
CETS01131688
372845
Bacteroidota
CCA
Trp
>WENV170372773
CETS01132138
372845
Bacteroidota
CCA
Trp
>WENV170372835
CETS01139335
401036
Bacteroidota
CCT
Arg
>WENV170372384
CETS01090590
118418
Bacteroidota
TAG
Leu
>WENV170371481
CETS01014695
24958
Bacteroidota
GGA
Ser
>WENV170371299
CETS01001247
356216
Bacteroidota
TTT
Lys
>WENV170371488
CETS01014975
399343
Bacteroidota
TTC
Glu
>WENV170371489
CETS01014975
399343
Bacteroidota
TTC
Glu
>WENV170372041
CETS01059993
299085
Bacteroidota
TTT
Lys
>WENV170371309
CETS01001920
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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