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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170374631
CETT01110963
400818
Bacteroidota
TTC
Glu
>WENV170373895
CETT01030798
364431
Bacteroidota
TCC
Gly
>WENV170374383
CETT01081058
364431
Bacteroidota
TCC
Gly
>WENV170374979
CETT01149025
281190
Bacteroidota
CAT
Met
>WENV170374977
CETT01148954
291910
Bacteroidota
TTG
Gln
>WENV170374453
CETT01088546
121312
Bacteroidota
TAG
Leu
>WENV170374395
CETT01081868
227539
Bacteroidota
GTT
Asn
>WENV170374606
CETT01107335
299065
Bacteroidota
TTG
Gln
>WENV170374907
CETT01141184
193718
Bacteroidota
GTC
Asp
>WENV170374964
CETT01146612
231584
Bacteroidota
TCT
Arg
>WENV170373781
CETT01020351
206043
Bacteroidota
GTC
Asp
>WENV170374372
CETT01079573
372845
Bacteroidota
CCA
Trp
>WENV170374470
CETT01090537
372845
Bacteroidota
CCA
Trp
>WENV170374619
CETT01108201
372845
Bacteroidota
CCA
Trp
>WENV170374846
CETT01134734
372845
Bacteroidota
CCA
Trp
>WENV170374301
CETT01071945
183480
Bacteroidota
TGC
Ala
>WENV170374701
CETT01119200
361792
Bacteroidota
GAA
Phe
>WENV170375021
CETT01151582
361792
Bacteroidota
GAA
Phe
>WENV170374790
CETT01128762
356216
Bacteroidota
TTT
Lys
>WENV170375028
CETT01151949
179598
Bacteroidota
CAT
Met
>WENV170373537
CETT01000815
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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