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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170432399
CEUS01088578
400818
Bacteroidota
TTC
Glu
>WENV170431904
CEUS01059247
156605
Bacteroidota
GAC
Val
>WENV170432320
CEUS01082228
303411
Bacteroidota
>WENV170431150
CEUS01022536
305664
Bacteroidota
CAT
Met
>WENV170434166
CEUS01239804
179905
Bacteroidota
GTT
Asn
>WENV170430896
CEUS01011388
299065
Bacteroidota
TTG
Gln
>WENV170435253
CEUS01382293
299032
Bacteroidota
GCC
Gly
>WENV170435272
CEUS01391346
299032
Bacteroidota
GCC
Gly
>WENV170432759
CEUS01117263
117927
Bacteroidota
TAG
Leu
>WENV170432794
CEUS01120721
182234
Bacteroidota
TGT
Thr
>WENV170432798
CEUS01121009
299085
Bacteroidota
TTT
Lys
>WENV170435418
CEUS01455854
183378
Bacteroidota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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