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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170460874
CEVC01172395
146962
Bacteroidota
CAT
Met
>WENV170460335
CEVC01141244
126974
Bacteroidota
TAC
Val
>WENV170460111
CEVC01114975
241019
Bacteroidota
CAT
Met
>WENV170460740
CEVC01170091
237361
Bacteroidota
TTG
Gln
>WENV170460002
CEVC01103731
127464
Bacteroidota
TAC
Val
>WENV170459551
CEVC01064030
145683
Bacteroidota
TGC
Ala
>WENV170458758
CEVC01000893
236125
Bacteroidota
GAA
Phe
>WENV170459221
CEVC01036647
127458
Bacteroidota
GAC
Val
>WENV170458935
CEVC01015158
60611
Bacteroidota
GCT
Ser
>WENV170460145
CEVC01119600
241469
Bacteroidota
GAA
Phe
>WENV170459362
CEVC01048418
96678
Bacteroidota
TAG
Leu
>WENV170458877
CEVC01011127
127414
Bacteroidota
TGG
Pro
>WENV170459097
CEVC01026855
238764
Bacteroidota
>WENV170460524
CEVC01158281
343033
Bacteroidota
TTC
Glu
>WENV170459328
CEVC01045532
342872
Bacteroidota
GGT
Thr
>WENV170460307
CEVC01137803
246641
Bacteroidota
GAA
Phe
>WENV170459562
CEVC01064800
246641
Bacteroidota
GAA
Phe
>WENV170460136
CEVC01118059
240901
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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