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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170513826
CEWA01034129
400818
Bacteroidota
TTC
Glu
>WENV170514269
CEWA01071256
400818
Bacteroidota
TTC
Glu
>WENV170513992
CEWA01045551
155786
Bacteroidota
TGG
Pro
>WENV170514270
CEWA01071519
320669
Bacteroidota
GAA
Phe
>WENV170514145
CEWA01058892
336507
Bacteroidota
TCC
Gly
>WENV170514578
CEWA01096141
336507
Bacteroidota
TCC
Gly
>WENV170513941
CEWA01042228
130793
Bacteroidota
TAG
Leu
>WENV170513929
CEWA01041669
155808
Bacteroidota
TGG
Pro
>WENV170514425
CEWA01084410
155808
Bacteroidota
TGG
Pro
>WENV170514621
CEWA01097707
155808
Bacteroidota
TGG
Pro
>WENV170514041
CEWA01050263
177083
Bacteroidota
TGT
Thr
>WENV170513682
CEWA01022913
227539
Bacteroidota
GTT
Asn
>WENV170514226
CEWA01066863
227539
Bacteroidota
GTT
Asn
>WENV170514400
CEWA01083011
235895
Bacteroidota
GTT
Asn
>WENV170513678
CEWA01022211
347386
Bacteroidota
CCA
Trp
>WENV170513782
CEWA01031040
347386
Bacteroidota
CCA
Trp
>WENV170513805
CEWA01032097
233847
Bacteroidota
TGC
Ala
>WENV170513574
CEWA01013405
183480
Bacteroidota
TGC
Ala
>WENV170513795
CEWA01031659
56162
Bacteroidota
TGA
Ser
>WENV170514382
CEWA01081356
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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