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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541749
CXPS01000051
285360
Bacteroidota
TTT
Lys
>WENV170541818
CXPS01001402
285360
Bacteroidota
TTT
Lys
>WENV170541772
CXPS01000150
398829
Bacteroidota
CCT
Arg
>WENV170541745
CXPS01000047
20492
Bacteroidota
GGA
Ser
>WENV170541816
CXPS01001392
20492
Bacteroidota
GGA
Ser
>WENV170541733
CXPS01000014
56493
Bacteroidota
TGA
Ser
>WENV170541788
CXPS01000319
156406
Bacteroidota
TAC
Val
>WENV170541789
CXPS01000319
156406
Bacteroidota
TAC
Val
>WENV170541773
CXPS01000152
57807
Bacteroidota
TGA
Ser
>WENV170541738
CXPS01000022
398860
Bacteroidota
CTC
Glu
>WENV170541732
CXPS01000006
480404
Bacteroidota
TTG
Gln
>WENV170541761
CXPS01000075
99847
Bacteroidota
GTA
Tyr
>WENV170541768
CXPS01000101
99847
Bacteroidota
GTA
Tyr
>WENV170541809
CXPS01001314
99847
Bacteroidota
GTA
Tyr
>WENV170541828
CXPS01001652
99847
Bacteroidota
GTA
Tyr
>WENV170541734
CXPS01000014
20766
Bacteroidota
GGA
Ser
>WENV170541822
CXPS01001488
20766
Bacteroidota
GGA
Ser
>WENV170541740
CXPS01000024
176192
Bacteroidota
TCT
Arg
>WENV170541757
CXPS01000063
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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