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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542551
CXQE01000178
73057
Bacteroidota
GAG
Leu
>WENV170542585
CXQE01000868
73057
Bacteroidota
GAG
Leu
>WENV170542520
CXQE01000048
280557
Bacteroidota
CAT
Met
>WENV170542548
CXQE01000174
398872
Bacteroidota
GGT
Thr
>WENV170542497
CXQE01000001
175936
Bacteroidota
CAT
Met
>WENV170542533
CXQE01000078
57807
Bacteroidota
TGA
Ser
>WENV170542540
CXQE01000122
57807
Bacteroidota
TGA
Ser
>WENV170542505
CXQE01000016
398860
Bacteroidota
CTC
Glu
>WENV170542537
CXQE01000114
480404
Bacteroidota
TTG
Gln
>WENV170542511
CXQE01000025
99847
Bacteroidota
GTA
Tyr
>WENV170542524
CXQE01000061
99847
Bacteroidota
GTA
Tyr
>WENV170542575
CXQE01000728
99847
Bacteroidota
GTA
Tyr
>WENV170542501
CXQE01000005
399026
Bacteroidota
CCT
Arg
>WENV170542542
CXQE01000126
20766
Bacteroidota
GGA
Ser
>WENV170542522
CXQE01000052
175844
Bacteroidota
GGC
Ala
>WENV170542500
CXQE01000005
280532
Bacteroidota
>WENV170542498
CXQE01000002
480318
Bacteroidota
CTG
Gln
>WENV170542499
CXQE01000002
158068
Bacteroidota
GGG
Pro
>WENV170542555
CXQE01000203
176192
Bacteroidota
TCT
Arg
>WENV170542534
CXQE01000081
117804
Bacteroidota
TAG
Leu
>WENV170542541
CXQE01000125
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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