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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542855
CXQJ01000204
73057
Bacteroidota
GAG
Leu
>WENV170542883
CXQJ01001562
73057
Bacteroidota
GAG
Leu
>WENV170542819
CXQJ01000018
280557
Bacteroidota
CAT
Met
>WENV170542864
CXQJ01000231
398872
Bacteroidota
GGT
Thr
>WENV170542826
CXQJ01000049
175936
Bacteroidota
CAT
Met
>WENV170542834
CXQJ01000079
57807
Bacteroidota
TGA
Ser
>WENV170542841
CXQJ01000098
57807
Bacteroidota
TGA
Ser
>WENV170542810
CXQJ01000001
398860
Bacteroidota
CTC
Glu
>WENV170542820
CXQJ01000021
480404
Bacteroidota
TTG
Gln
>WENV170542830
CXQJ01000062
99847
Bacteroidota
GTA
Tyr
>WENV170542828
CXQJ01000061
399026
Bacteroidota
CCT
Arg
>WENV170542823
CXQJ01000036
20766
Bacteroidota
GGA
Ser
>WENV170542818
CXQJ01000017
175844
Bacteroidota
GGC
Ala
>WENV170542845
CXQJ01000137
280532
Bacteroidota
>WENV170542811
CXQJ01000002
480318
Bacteroidota
CTG
Gln
>WENV170542844
CXQJ01000129
176192
Bacteroidota
TCT
Arg
>WENV170542843
CXQJ01000115
117804
Bacteroidota
TAG
Leu
>WENV170542822
CXQJ01000028
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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