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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545596
CXSE01000038
285360
Bacteroidota
TTT
Lys
>WENV170545655
CXSE01003194
285360
Bacteroidota
TTT
Lys
>WENV170545586
CXSE01000014
398829
Bacteroidota
CCT
Arg
>WENV170545621
CXSE01000137
20492
Bacteroidota
GGA
Ser
>WENV170545600
CXSE01000048
56493
Bacteroidota
TGA
Ser
>WENV170545642
CXSE01002886
56493
Bacteroidota
TGA
Ser
>WENV170545620
CXSE01000124
351598
Bacteroidota
CGG
Pro
>WENV170545609
CXSE01000060
398860
Bacteroidota
CTC
Glu
>WENV170545599
CXSE01000045
480404
Bacteroidota
TTG
Gln
>WENV170545638
CXSE01001058
99847
Bacteroidota
GTA
Tyr
>WENV170545639
CXSE01001176
99847
Bacteroidota
GTA
Tyr
>WENV170545648
CXSE01003074
99847
Bacteroidota
GTA
Tyr
>WENV170545593
CXSE01000033
99847
Bacteroidota
GTA
Tyr
>WENV170545601
CXSE01000048
27524
Bacteroidota
GGA
Ser
>WENV170545581
CXSE01000002
159415
Bacteroidota
TAC
Val
>WENV170545582
CXSE01000002
159415
Bacteroidota
TAC
Val
>WENV170545583
CXSE01000010
176192
Bacteroidota
TCT
Arg
>WENV170545631
CXSE01000447
69204
Bacteroidota
TGA
Ser
>WENV170545637
CXSE01001030
365112
Bacteroidota
TTT
Lys
>WENV170545649
CXSE01003120
365112
Bacteroidota
TTT
Lys
>WENV170545613
CXSE01000084
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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