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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010724
FLSD01079482
400161
Bacteroidota
GGT
Thr
>WENV180010801
FLSD01172394
482907
Bacteroidota
CTG
Gln
>WENV180010779
FLSD01143482
481329
Bacteroidota
>WENV180010671
FLSD01047263
312035
Bacteroidota
CCA
Trp
>WENV180010670
FLSD01047050
75001
Bacteroidota
CAA
Leu
>WENV180010829
FLSD01219140
404109
Bacteroidota
CTC
Glu
>WENV180010625
FLSD01028274
404661
Bacteroidota
GTG
His
>WENV180010770
FLSD01126147
482908
Bacteroidota
GCA
Cys
>WENV180010559
FLSD01010907
30780
Bacteroidota
GCT
Ser
>WENV180010515
FLSD01003694
404662
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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