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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180117467
OARK01003963
400161
Bacteroidota
GGT
Thr
>WENV180117611
OARK01030249
400161
Bacteroidota
GGT
Thr
>WENV180117406
OARK01001661
156422
Bacteroidota
TAC
Val
>WENV180117351
OARK01000365
118221
Bacteroidota
CAA
Leu
>WENV180117420
OARK01002341
118221
Bacteroidota
CAA
Leu
>WENV180117445
OARK01003595
118221
Bacteroidota
CAA
Leu
>WENV180117309
OARK01000063
56385
Bacteroidota
TGA
Ser
>WENV180117343
OARK01000309
56385
Bacteroidota
TGA
Ser
>WENV180117655
OARK01046542
56385
Bacteroidota
TGA
Ser
>WENV180117437
OARK01003210
312035
Bacteroidota
CCA
Trp
>WENV180117524
OARK01009084
178133
Bacteroidota
GAT
Ile
>WENV180117374
OARK01000627
280451
Bacteroidota
CGT
Thr
>WENV180117429
OARK01002604
404109
Bacteroidota
CTC
Glu
>WENV180117651
OARK01045218
404109
Bacteroidota
CTC
Glu
>WENV180117669
OARK01048424
404109
Bacteroidota
CTC
Glu
>WENV180117308
OARK01000058
46648
Bacteroidota
TAA
Leu
>WENV180117357
OARK01000432
46648
Bacteroidota
TAA
Leu
>WENV180117653
OARK01045360
46648
Bacteroidota
TAA
Leu
>WENV180117666
OARK01048315
187400
Bacteroidota
GTT
Asn
>WENV180117373
OARK01000597
187814
Bacteroidota
GTC
Asp
>WENV180117404
OARK01001649
187814
Bacteroidota
GTC
Asp
>WENV180117419
OARK01002323
187814
Bacteroidota
GTC
Asp
>WENV180117432
OARK01003116
187814
Bacteroidota
GTC
Asp
>WENV180117446
OARK01003765
187814
Bacteroidota
GTC
Asp
>WENV180117664
OARK01048312
187814
Bacteroidota
GTC
Asp
>WENV180117301
OARK01000044
158068
Bacteroidota
GGG
Pro
>WENV180117344
OARK01000311
158068
Bacteroidota
GGG
Pro
>WENV180117413
OARK01001888
481328
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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