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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180134255
OATK01000006
235097
Bacteroidota
TTT
Lys
>WENV180134629
OATK01000714
235097
Bacteroidota
TTT
Lys
>WENV180134926
OATK01002856
235097
Bacteroidota
TTT
Lys
>WENV180134262
OATK01000009
235102
Bacteroidota
CGT
Thr
>WENV180135226
OATK01010937
144657
Bacteroidota
CGG
Pro
>WENV180134449
OATK01000234
243025
Bacteroidota
CAT
Met
>WENV180134674
OATK01000808
243025
Bacteroidota
CAT
Met
>WENV180134381
OATK01000122
338155
Bacteroidota
CTC
Glu
>WENV180134895
OATK01002566
339341
Bacteroidota
GGT
Thr
>WENV180134554
OATK01000490
343138
Bacteroidota
CCT
Arg
>WENV180134290
OATK01000035
343138
Bacteroidota
CCT
Arg
>WENV180135135
OATK01007162
58715
Bacteroidota
GAG
Leu
>WENV180134647
OATK01000757
17323
Bacteroidota
GGA
Ser
>WENV180134417
OATK01000184
95618
Bacteroidota
TAG
Leu
>WENV180134764
OATK01001389
338486
Bacteroidota
CAT
Met
>WENV180134606
OATK01000626
338486
Bacteroidota
CAT
Met
>WENV180134285
OATK01000031
411543
Bacteroidota
CTG
Gln
>WENV180134367
OATK01000104
59689
Bacteroidota
CAG
Leu
>WENV180134355
OATK01000098
436206
Bacteroidota
TTG
Gln
>WENV180134563
OATK01000504
20893
Bacteroidota
GGA
Ser
>WENV180134617
OATK01000643
344692
Bacteroidota
GGT
Thr
>WENV180134451
OATK01000235
235182
Bacteroidota
>WENV180134604
OATK01000619
272983
Bacteroidota
CGT
Thr
>WENV180134518
OATK01000390
338124
Bacteroidota
CCG
Arg
>WENV180134931
OATK01002911
235203
Bacteroidota
TTT
Lys
>WENV180134793
OATK01001594
235203
Bacteroidota
TTT
Lys
>WENV180134808
OATK01001763
238121
Bacteroidota
CTT
Lys
>WENV180134807
OATK01001763
238121
Bacteroidota
CTT
Lys
>WENV180134455
OATK01000260
338132
Bacteroidota
GCA
Cys
>WENV180134257
OATK01000006
338132
Bacteroidota
GCA
Cys
>WENV180134303
OATK01000044
144688
Bacteroidota
CAT
Met
>WENV180134809
OATK01001763
45423
Bacteroidota
TGA
Ser
>WENV180134252
OATK01000004
193809
Bacteroidota
CAT
Met
>WENV180134293
OATK01000038
181746
Bacteroidota
GGC
Ala
>WENV180134738
OATK01001219
58714
Bacteroidota
CAA
Leu
>WENV180134431
OATK01000199
301449
Bacteroidota
CGG
Pro
>WENV180134318
OATK01000063
301449
Bacteroidota
CGG
Pro
>WENV180134402
OATK01000154
144933
Bacteroidota
TCT
Arg
>WENV180134313
OATK01000056
144656
Bacteroidota
GTG
His
>WENV180134447
OATK01000232
235207
Bacteroidota
CAT
Met
>WENV180134268
OATK01000015
235207
Bacteroidota
CAT
Met
>WENV180134734
OATK01001168
143169
Bacteroidota
GGG
Pro
>WENV180134289
OATK01000034
143169
Bacteroidota
GGG
Pro
>WENV180134286
OATK01000031
143169
Bacteroidota
GGG
Pro
>WENV180134939
OATK01002943
144659
Bacteroidota
GTG
His
>WENV180134986
OATK01003562
80607
Bacteroidota
GTA
Tyr
>WENV180134349
OATK01000093
80607
Bacteroidota
GTA
Tyr
>WENV180134247
OATK01000002
80607
Bacteroidota
GTA
Tyr
>WENV180135098
OATK01006072
80614
Bacteroidota
>WENV180134317
OATK01000059
154643
Bacteroidota
CAT
Met
>WENV180134278
OATK01000023
144590
Bacteroidota
GTT
Asn
>WENV180134277
OATK01000023
144590
Bacteroidota
GTT
Asn
>WENV180134393
OATK01000139
95559
Bacteroidota
TAG
Leu
>WENV180134345
OATK01000090
144655
Bacteroidota
GGC
Ala
>WENV180134556
OATK01000490
338164
Bacteroidota
TTC
Glu
>WENV180134555
OATK01000490
338164
Bacteroidota
TTC
Glu
>WENV180135056
OATK01004532
95875
Bacteroidota
TAG
Leu
>WENV180134304
OATK01000044
338314
Bacteroidota
CCT
Arg
>WENV180134977
OATK01003386
139743
Bacteroidota
GGG
Pro
>WENV180135303
OATK01018368
240012
Bacteroidota
CCC
Gly
>WENV180134276
OATK01000023
44852
Bacteroidota
TAA
Leu
>WENV180134723
OATK01001085
147439
Bacteroidota
TCT
Arg
>WENV180134987
OATK01003581
411550
Bacteroidota
CTG
Gln
>WENV180134421
OATK01000192
425638
Bacteroidota
CTG
Gln
>WENV180135014
OATK01003736
94703
Bacteroidota
GTA
Tyr
>WENV180134419
OATK01000190
94703
Bacteroidota
GTA
Tyr
>WENV180134590
OATK01000558
353927
Bacteroidota
TTC
Glu
>WENV180134498
OATK01000348
185921
Bacteroidota
GTC
Asp
>WENV180134497
OATK01000348
185921
Bacteroidota
GTC
Asp
>WENV180134491
OATK01000336
139062
Bacteroidota
TGG
Pro
>WENV180135033
OATK01004074
23696
Bacteroidota
GCT
Ser
>WENV180134520
OATK01000394
414426
Bacteroidota
CTG
Gln
>WENV180134661
OATK01000783
56823
Bacteroidota
TGA
Ser
>WENV180134478
OATK01000299
56823
Bacteroidota
TGA
Ser
>WENV180134263
OATK01000011
16224
Bacteroidota
GGA
Ser
>WENV180134288
OATK01000034
16220
Bacteroidota
GGA
Ser
>WENV180135571
OATK01102579
235129
Bacteroidota
GCC
Gly
>WENV180134814
OATK01001811
235129
Bacteroidota
GCC
Gly
>WENV180135072
OATK01005064
313363
Bacteroidota
GAA
Phe
>WENV180134254
OATK01000005
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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