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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180142437
OATW01000175
117741
Bacteroidota
TAG
Leu
>WENV180142526
OATW01000674
398829
Bacteroidota
CCT
Arg
>WENV180142623
OATW01013631
175838
Bacteroidota
GTT
Asn
>WENV180142474
OATW01000305
73057
Bacteroidota
GAG
Leu
>WENV180142440
OATW01000188
280557
Bacteroidota
CAT
Met
>WENV180142454
OATW01000234
20206
Bacteroidota
GGA
Ser
>WENV180142577
OATW01001380
175903
Bacteroidota
GTG
His
>WENV180142484
OATW01000338
351598
Bacteroidota
CGG
Pro
>WENV180142543
OATW01000875
398872
Bacteroidota
GGT
Thr
>WENV180142349
OATW01000019
169545
Bacteroidota
TGG
Pro
>WENV180142434
OATW01000168
175936
Bacteroidota
CAT
Met
>WENV180142444
OATW01000197
56072
Bacteroidota
TAA
Leu
>WENV180142368
OATW01000037
57807
Bacteroidota
TGA
Ser
>WENV180142369
OATW01000037
57807
Bacteroidota
TGA
Ser
>WENV180142613
OATW01006818
175902
Bacteroidota
GGC
Ala
>WENV180142415
OATW01000119
398860
Bacteroidota
CTC
Glu
>WENV180142365
OATW01000030
480404
Bacteroidota
TTG
Gln
>WENV180142537
OATW01000757
280451
Bacteroidota
CGT
Thr
>WENV180142386
OATW01000055
99847
Bacteroidota
GTA
Tyr
>WENV180142469
OATW01000298
99847
Bacteroidota
GTA
Tyr
>WENV180142542
OATW01000875
99847
Bacteroidota
GTA
Tyr
>WENV180142413
OATW01000112
488746
Bacteroidota
CTG
Gln
>WENV180142409
OATW01000092
399026
Bacteroidota
CCT
Arg
>WENV180142387
OATW01000056
20766
Bacteroidota
GGA
Ser
>WENV180142389
OATW01000063
280532
Bacteroidota
>WENV180142395
OATW01000072
229246
Bacteroidota
GGC
Ala
>WENV180142316
OATW01000006
480318
Bacteroidota
CTG
Gln
>WENV180142456
OATW01000252
398828
Bacteroidota
CCG
Arg
>WENV180142470
OATW01000299
140771
Bacteroidota
>WENV180142375
OATW01000042
176192
Bacteroidota
TCT
Arg
>WENV180142609
OATW01005188
280446
Bacteroidota
TTT
Lys
>WENV180142429
OATW01000150
484496
Bacteroidota
TTG
Gln
>WENV180142376
OATW01000043
117804
Bacteroidota
TAG
Leu
>WENV180142487
OATW01000340
365112
Bacteroidota
TTT
Lys
>WENV180142446
OATW01000207
398836
Bacteroidota
GCA
Cys
>WENV180142451
OATW01000230
398836
Bacteroidota
GCA
Cys
>WENV180142317
OATW01000006
170323
Bacteroidota
GGG
Pro
>WENV180142356
OATW01000027
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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