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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180158466
OAVA01000001
338155
Bacteroidota
CTC
Glu
>WENV180158475
OAVA01000002
95618
Bacteroidota
TAG
Leu
>WENV180158477
OAVA01000002
411629
Bacteroidota
TTG
Gln
>WENV180158503
OAVA01000007
411543
Bacteroidota
CTG
Gln
>WENV180158504
OAVA01000007
132360
Bacteroidota
GGG
Pro
>WENV180158521
OAVA01000015
144933
Bacteroidota
TCT
Arg
>WENV180158532
OAVA01000017
419272
Bacteroidota
CTG
Gln
>WENV180158533
OAVA01000017
16220
Bacteroidota
GGA
Ser
>WENV180158534
OAVA01000017
132360
Bacteroidota
GGG
Pro
>WENV180158547
OAVA01000022
144656
Bacteroidota
GTG
His
>WENV180158548
OAVA01000022
16224
Bacteroidota
GGA
Ser
>WENV180158549
OAVA01000023
52358
Bacteroidota
TGA
Ser
>WENV180158550
OAVA01000023
52358
Bacteroidota
TGA
Ser
>WENV180158551
OAVA01000023
338132
Bacteroidota
GCA
Cys
>WENV180158552
OAVA01000025
80607
Bacteroidota
GTA
Tyr
>WENV180158555
OAVA01000026
338314
Bacteroidota
CCT
Arg
>WENV180158584
OAVA01000043
301449
Bacteroidota
CGG
Pro
>WENV180158608
OAVA01000070
144688
Bacteroidota
CAT
Met
>WENV180158611
OAVA01000080
301449
Bacteroidota
CGG
Pro
>WENV180158622
OAVA01000088
80607
Bacteroidota
GTA
Tyr
>WENV180158627
OAVA01000092
338165
Bacteroidota
GGT
Thr
>WENV180158632
OAVA01000097
338125
Bacteroidota
CCT
Arg
>WENV180158636
OAVA01000104
235097
Bacteroidota
TTT
Lys
>WENV180158637
OAVA01000106
235102
Bacteroidota
CGT
Thr
>WENV180158638
OAVA01000113
95559
Bacteroidota
TAG
Leu
>WENV180158646
OAVA01000139
272983
Bacteroidota
CGT
Thr
>WENV180158652
OAVA01000160
235182
Bacteroidota
>WENV180158656
OAVA01000163
338132
Bacteroidota
GCA
Cys
>WENV180158662
OAVA01000200
52358
Bacteroidota
TGA
Ser
>WENV180158663
OAVA01000206
415410
Bacteroidota
TTG
Gln
>WENV180158664
OAVA01000211
132360
Bacteroidota
GGG
Pro
>WENV180158669
OAVA01000240
235207
Bacteroidota
CAT
Met
>WENV180158676
OAVA01000294
52358
Bacteroidota
TGA
Ser
>WENV180158677
OAVA01000295
144933
Bacteroidota
TCT
Arg
>WENV180158681
OAVA01000313
235097
Bacteroidota
TTT
Lys
>WENV180158683
OAVA01000324
425638
Bacteroidota
CTG
Gln
>WENV180158686
OAVA01000348
338132
Bacteroidota
GCA
Cys
>WENV180158688
OAVA01000356
301449
Bacteroidota
CGG
Pro
>WENV180158691
OAVA01000386
144655
Bacteroidota
GGC
Ala
>WENV180158701
OAVA01000523
415410
Bacteroidota
TTG
Gln
>WENV180158702
OAVA01000531
52358
Bacteroidota
TGA
Ser
>WENV180158706
OAVA01000581
52358
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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