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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180165170
OAVK01000125
113604
Bacteroidota
>WENV180165167
OAVK01000125
113604
Bacteroidota
>WENV180165046
OAVK01000015
193809
Bacteroidota
CAT
Met
>WENV180165081
OAVK01000038
235207
Bacteroidota
CAT
Met
>WENV180165085
OAVK01000045
338124
Bacteroidota
CCG
Arg
>WENV180165059
OAVK01000023
338125
Bacteroidota
CCT
Arg
>WENV180165615
OAVK01012710
235102
Bacteroidota
CGT
Thr
>WENV180165066
OAVK01000031
419272
Bacteroidota
CTG
Gln
>WENV180165050
OAVK01000017
338132
Bacteroidota
GCA
Cys
>WENV180165162
OAVK01000120
16224
Bacteroidota
GGA
Ser
>WENV180165067
OAVK01000031
16220
Bacteroidota
GGA
Ser
>WENV180165012
OAVK01000006
144655
Bacteroidota
GGC
Ala
>WENV180165068
OAVK01000031
132360
Bacteroidota
GGG
Pro
>WENV180165123
OAVK01000076
80607
Bacteroidota
GTA
Tyr
>WENV180165027
OAVK01000012
80607
Bacteroidota
GTA
Tyr
>WENV180165190
OAVK01000145
144656
Bacteroidota
GTG
His
>WENV180165417
OAVK01001303
144590
Bacteroidota
GTT
Asn
>WENV180165416
OAVK01001303
144590
Bacteroidota
GTT
Asn
>WENV180165098
OAVK01000055
44852
Bacteroidota
TAA
Leu
>WENV180165181
OAVK01000138
95559
Bacteroidota
TAG
Leu
>WENV180165284
OAVK01000392
50727
Bacteroidota
TGA
Ser
>WENV180165121
OAVK01000075
50727
Bacteroidota
TGA
Ser
>WENV180165350
OAVK01000776
415410
Bacteroidota
TTG
Gln
>WENV180165070
OAVK01000033
235097
Bacteroidota
TTT
Lys
>WENV180165295
OAVK01000437
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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