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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180214708
OBAP01046972
402532
Bacteroidota
GCC
Gly
>WENV180214771
OBAP01074182
400818
Bacteroidota
TTC
Glu
>WENV180214681
OBAP01040199
176863
Bacteroidota
CAT
Met
>WENV180214778
OBAP01077873
120026
Bacteroidota
GTA
Tyr
>WENV180214504
OBAP01005246
281336
Bacteroidota
TCC
Gly
>WENV180214586
OBAP01016298
320084
Bacteroidota
TTT
Lys
>WENV180214623
OBAP01022844
155786
Bacteroidota
TGG
Pro
>WENV180214574
OBAP01014013
155808
Bacteroidota
TGG
Pro
>WENV180214546
OBAP01011726
298625
Bacteroidota
CAT
Met
>WENV180214463
OBAP01002431
140868
Bacteroidota
GTA
Tyr
>WENV180214534
OBAP01008327
193718
Bacteroidota
GTC
Asp
>WENV180214537
OBAP01008947
181598
Bacteroidota
GTT
Asn
>WENV180214529
OBAP01007488
118749
Bacteroidota
GTA
Tyr
>WENV180214747
OBAP01062377
182234
Bacteroidota
TGT
Thr
>WENV180214545
OBAP01010969
176557
Bacteroidota
CAT
Met
>WENV180214714
OBAP01051158
179598
Bacteroidota
CAT
Met
>WENV180214548
OBAP01011776
399343
Bacteroidota
TTC
Glu
>WENV180214607
OBAP01019667
480568
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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