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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180225187
OBBM01000008
398829
Bacteroidota
CCT
Arg
>WENV180225189
OBBM01000008
56072
Bacteroidota
TAA
Leu
>WENV180225195
OBBM01000009
351598
Bacteroidota
CGG
Pro
>WENV180225192
OBBM01000009
99847
Bacteroidota
GTA
Tyr
>WENV180225203
OBBM01000012
365112
Bacteroidota
TTT
Lys
>WENV180225231
OBBM01000022
365112
Bacteroidota
TTT
Lys
>WENV180225233
OBBM01000024
398828
Bacteroidota
CCG
Arg
>WENV180225235
OBBM01000029
99847
Bacteroidota
GTA
Tyr
>WENV180225239
OBBM01000042
20206
Bacteroidota
GGA
Ser
>WENV180225257
OBBM01000049
280557
Bacteroidota
CAT
Met
>WENV180225274
OBBM01000076
174201
Bacteroidota
GGG
Pro
>WENV180225275
OBBM01000076
488746
Bacteroidota
CTG
Gln
>WENV180225277
OBBM01000088
175903
Bacteroidota
GTG
His
>WENV180225281
OBBM01000096
140771
Bacteroidota
>WENV180225284
OBBM01000096
140771
Bacteroidota
>WENV180225290
OBBM01000121
484496
Bacteroidota
TTG
Gln
>WENV180225292
OBBM01000126
175902
Bacteroidota
GGC
Ala
>WENV180225297
OBBM01000188
398836
Bacteroidota
GCA
Cys
>WENV180225298
OBBM01000195
117741
Bacteroidota
TAG
Leu
>WENV180225306
OBBM01000313
175838
Bacteroidota
GTT
Asn
>WENV180225307
OBBM01000313
175838
Bacteroidota
GTT
Asn
>WENV180225308
OBBM01000313
175838
Bacteroidota
GTT
Asn
>WENV180225310
OBBM01000362
27502
Bacteroidota
GGA
Ser
>WENV180225356
OBBM01001511
280451
Bacteroidota
CGT
Thr
>WENV180225391
OBBM01007733
201819
Bacteroidota
CAT
Met
>WENV180225396
OBBM01007846
56493
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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