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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180279773
OBHX01086218
235097
Bacteroidota
TTT
Lys
>WENV180277303
OBHX01000012
95987
Bacteroidota
CAA
Leu
>WENV180277369
OBHX01000046
339412
Bacteroidota
GGT
Thr
>WENV180278556
OBHX01005443
235102
Bacteroidota
CGT
Thr
>WENV180279596
OBHX01052723
237796
Bacteroidota
CGT
Thr
>WENV180278461
OBHX01004291
144657
Bacteroidota
CGG
Pro
>WENV180280043
OBHX01209525
243025
Bacteroidota
CAT
Met
>WENV180277990
OBHX01001527
97336
Bacteroidota
CAG
Leu
>WENV180277692
OBHX01000564
338155
Bacteroidota
CTC
Glu
>WENV180280194
OBHX01255672
343138
Bacteroidota
CCT
Arg
>WENV180279065
OBHX01015241
58715
Bacteroidota
GAG
Leu
>WENV180278905
OBHX01010439
46165
Bacteroidota
TGA
Ser
>WENV180277717
OBHX01000633
340120
Bacteroidota
CCT
Arg
>WENV180279625
OBHX01055513
340120
Bacteroidota
CCT
Arg
>WENV180279062
OBHX01015214
338486
Bacteroidota
CAT
Met
>WENV180277545
OBHX01000249
413663
Bacteroidota
CTG
Gln
>WENV180277544
OBHX01000249
413663
Bacteroidota
CTG
Gln
>WENV180277543
OBHX01000249
413663
Bacteroidota
CTG
Gln
>WENV180278213
OBHX01002759
415410
Bacteroidota
TTG
Gln
>WENV180277639
OBHX01000455
136244
Bacteroidota
TAC
Val
>WENV180277370
OBHX01000046
237797
Bacteroidota
CCA
Trp
>WENV180279064
OBHX01015241
59689
Bacteroidota
CAG
Leu
>WENV180278906
OBHX01010439
20893
Bacteroidota
GGA
Ser
>WENV180277471
OBHX01000145
412479
Bacteroidota
TTG
Gln
>WENV180277294
OBHX01000005
147147
Bacteroidota
GTG
His
>WENV180277293
OBHX01000005
147147
Bacteroidota
GTG
His
>WENV180279741
OBHX01077750
235182
Bacteroidota
>WENV180278956
OBHX01011566
338124
Bacteroidota
CCG
Arg
>WENV180279069
OBHX01015255
238121
Bacteroidota
CTT
Lys
>WENV180278724
OBHX01007295
126641
Bacteroidota
TAC
Val
>WENV180278723
OBHX01007295
126641
Bacteroidota
TAC
Val
>WENV180279398
OBHX01034477
338132
Bacteroidota
GCA
Cys
>WENV180278078
OBHX01001964
338132
Bacteroidota
GCA
Cys
>WENV180278062
OBHX01001905
338132
Bacteroidota
GCA
Cys
>WENV180277834
OBHX01000965
338132
Bacteroidota
GCA
Cys
>WENV180279070
OBHX01015255
45423
Bacteroidota
TGA
Ser
>WENV180277826
OBHX01000944
238810
Bacteroidota
CGG
Pro
>WENV180280196
OBHX01256123
193809
Bacteroidota
CAT
Met
>WENV180279515
OBHX01044359
127253
Bacteroidota
GGG
Pro
>WENV180278570
OBHX01005571
127253
Bacteroidota
GGG
Pro
>WENV180277718
OBHX01000633
37076
Bacteroidota
TAA
Leu
>WENV180277472
OBHX01000145
37076
Bacteroidota
TAA
Leu
>WENV180279166
OBHX01019468
58714
Bacteroidota
CAA
Leu
>WENV180278453
OBHX01004212
301449
Bacteroidota
CGG
Pro
>WENV180278007
OBHX01001606
301449
Bacteroidota
CGG
Pro
>WENV180277821
OBHX01000918
301449
Bacteroidota
CGG
Pro
>WENV180279545
OBHX01047846
301449
Bacteroidota
CGG
Pro
>WENV180277665
OBHX01000495
144933
Bacteroidota
TCT
Arg
>WENV180279135
OBHX01017928
144656
Bacteroidota
GTG
His
>WENV180279128
OBHX01017461
235207
Bacteroidota
CAT
Met
>WENV180279232
OBHX01022753
144659
Bacteroidota
GTG
His
>WENV180279154
OBHX01018653
235180
Bacteroidota
CCA
Trp
>WENV180278462
OBHX01004291
235180
Bacteroidota
CCA
Trp
>WENV180278426
OBHX01004033
144596
Bacteroidota
GGC
Ala
>WENV180280140
OBHX01247977
80607
Bacteroidota
GTA
Tyr
>WENV180279635
OBHX01056927
80607
Bacteroidota
GTA
Tyr
>WENV180280198
OBHX01256527
113604
Bacteroidota
>WENV180277282
OBHX01000002
344769
Bacteroidota
CTC
Glu
>WENV180277281
OBHX01000002
344769
Bacteroidota
CTC
Glu
>WENV180277280
OBHX01000002
344769
Bacteroidota
CTC
Glu
>WENV180277716
OBHX01000620
16999
Bacteroidota
GGA
Ser
>WENV180278629
OBHX01006339
339996
Bacteroidota
TTC
Glu
>WENV180278428
OBHX01004053
147148
Bacteroidota
CAT
Met
>WENV180278987
OBHX01012480
52358
Bacteroidota
TGA
Ser
>WENV180278427
OBHX01004048
52358
Bacteroidota
TGA
Ser
>WENV180277862
OBHX01001072
52358
Bacteroidota
TGA
Ser
>WENV180277456
OBHX01000134
52358
Bacteroidota
TGA
Ser
>WENV180279666
OBHX01064524
52358
Bacteroidota
TGA
Ser
>WENV180280082
OBHX01227949
175704
Bacteroidota
TGC
Ala
>WENV180278202
OBHX01002722
144590
Bacteroidota
GTT
Asn
>WENV180279697
OBHX01071921
95559
Bacteroidota
TAG
Leu
>WENV180278388
OBHX01003874
419272
Bacteroidota
CTG
Gln
>WENV180278934
OBHX01011094
144655
Bacteroidota
GGC
Ala
>WENV180279049
OBHX01014819
338164
Bacteroidota
TTC
Glu
>WENV180279048
OBHX01014819
338164
Bacteroidota
TTC
Glu
>WENV180279203
OBHX01021095
95875
Bacteroidota
TAG
Leu
>WENV180280025
OBHX01198074
240012
Bacteroidota
CCC
Gly
>WENV180279371
OBHX01032202
44852
Bacteroidota
TAA
Leu
>WENV180279769
OBHX01084670
147439
Bacteroidota
TCT
Arg
>WENV180279739
OBHX01077039
95986
Bacteroidota
GTA
Tyr
>WENV180280227
OBHX01265681
338165
Bacteroidota
GGT
Thr
>WENV180279114
OBHX01016850
19528
Bacteroidota
GGA
Ser
>WENV180277288
OBHX01000002
196394
Bacteroidota
GTC
Asp
>WENV180277287
OBHX01000002
196394
Bacteroidota
GTC
Asp
>WENV180277286
OBHX01000002
196394
Bacteroidota
GTC
Asp
>WENV180277285
OBHX01000002
196394
Bacteroidota
GTC
Asp
>WENV180279440
OBHX01038054
132360
Bacteroidota
GGG
Pro
>WENV180278611
OBHX01006128
132360
Bacteroidota
GGG
Pro
>WENV180277947
OBHX01001347
132360
Bacteroidota
GGG
Pro
>WENV180278359
OBHX01003662
425638
Bacteroidota
CTG
Gln
>WENV180278021
OBHX01001720
425638
Bacteroidota
CTG
Gln
>WENV180277838
OBHX01000975
425638
Bacteroidota
CTG
Gln
>WENV180277564
OBHX01000296
239647
Bacteroidota
TTT
Lys
>WENV180277453
OBHX01000125
239647
Bacteroidota
TTT
Lys
>WENV180277439
OBHX01000106
185921
Bacteroidota
GTC
Asp
>WENV180279638
OBHX01059435
146762
Bacteroidota
TGG
Pro
>WENV180278865
OBHX01009483
412236
Bacteroidota
CCC
Gly
>WENV180279640
OBHX01059435
119518
Bacteroidota
CAG
Leu
>WENV180279817
OBHX01103237
16224
Bacteroidota
GGA
Ser
>WENV180278619
OBHX01006228
16220
Bacteroidota
GGA
Ser
>WENV180278222
OBHX01002795
338125
Bacteroidota
CCT
Arg
>WENV180279372
OBHX01032278
235129
Bacteroidota
GCC
Gly
>WENV180279063
OBHX01015241
235129
Bacteroidota
GCC
Gly
>WENV180277679
OBHX01000547
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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