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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180284463
OBID01044750
413186
Bacteroidota
>WENV180283905
OBID01006058
48896
Bacteroidota
>WENV180285983
OBID01876784
119517
Bacteroidota
CAA
Leu
>WENV180284655
OBID01078806
58714
Bacteroidota
CAA
Leu
>WENV180284117
OBID01015978
144695
Bacteroidota
CAT
Met
>WENV180283384
OBID01000001
193809
Bacteroidota
CAT
Met
>WENV180284076
OBID01014682
238756
Bacteroidota
CAT
Met
>WENV180284265
OBID01024383
147945
Bacteroidota
CAT
Met
>WENV180284150
OBID01017920
159417
Bacteroidota
CAT
Met
>WENV180284533
OBID01053190
418371
Bacteroidota
CCA
Trp
>WENV180285807
OBID01725985
237797
Bacteroidota
CCA
Trp
>WENV180284382
OBID01036832
412189
Bacteroidota
CCA
Trp
>WENV180283623
OBID01001137
412494
Bacteroidota
CCA
Trp
>WENV180285482
OBID01453397
338124
Bacteroidota
CCG
Arg
>WENV180283730
OBID01002109
352304
Bacteroidota
CCT
Arg
>WENV180283484
OBID01000244
352304
Bacteroidota
CCT
Arg
>WENV180285497
OBID01463039
237796
Bacteroidota
CGT
Thr
>WENV180284109
OBID01015589
344769
Bacteroidota
CTC
Glu
>WENV180283395
OBID01000012
413663
Bacteroidota
CTG
Gln
>WENV180284310
OBID01027614
241469
Bacteroidota
GAA
Phe
>WENV180283980
OBID01008655
251411
Bacteroidota
GAA
Phe
>WENV180285169
OBID01258017
59182
Bacteroidota
GAG
Leu
>WENV180283661
OBID01001449
82649
Bacteroidota
GAG
Leu
>WENV180284217
OBID01021336
83316
Bacteroidota
GAG
Leu
>WENV180285153
OBID01251265
193769
Bacteroidota
GAT
Ile
>WENV180284837
OBID01131014
285949
Bacteroidota
GCC
Gly
>WENV180283567
OBID01000760
238670
Bacteroidota
GCC
Gly
>WENV180283886
OBID01005465
45287
Bacteroidota
GCT
Ser
>WENV180284583
OBID01064540
17987
Bacteroidota
GGA
Ser
>WENV180283813
OBID01003507
28036
Bacteroidota
GGA
Ser
>WENV180284681
OBID01085929
171336
Bacteroidota
GGC
Ala
>WENV180283622
OBID01001137
343032
Bacteroidota
GGT
Thr
>WENV180284330
OBID01030017
360629
Bacteroidota
GGT
Thr
>WENV180283620
OBID01001137
81682
Bacteroidota
GTA
Tyr
>WENV180285544
OBID01515255
113741
Bacteroidota
GTA
Tyr
>WENV180283791
OBID01003143
147942
Bacteroidota
GTC
Asp
>WENV180286004
OBID01908158
150845
Bacteroidota
GTC
Asp
>WENV180283492
OBID01000307
196394
Bacteroidota
GTC
Asp
>WENV180285937
OBID01833277
148029
Bacteroidota
GTG
His
>WENV180283564
OBID01000734
168744
Bacteroidota
GTG
His
>WENV180285770
OBID01693488
159029
Bacteroidota
GTG
His
>WENV180283979
OBID01008602
148318
Bacteroidota
GTT
Asn
>WENV180283568
OBID01000760
61800
Bacteroidota
TAA
Leu
>WENV180283885
OBID01005461
37076
Bacteroidota
TAA
Leu
>WENV180283467
OBID01000174
37076
Bacteroidota
TAA
Leu
>WENV180284843
OBID01132817
37199
Bacteroidota
TAA
Leu
>WENV180284517
OBID01051645
127464
Bacteroidota
TAC
Val
>WENV180283818
OBID01003532
127464
Bacteroidota
TAC
Val
>WENV180283769
OBID01002914
136244
Bacteroidota
TAC
Val
>WENV180283605
OBID01000982
136244
Bacteroidota
TAC
Val
>WENV180283575
OBID01000809
136244
Bacteroidota
TAC
Val
>WENV180283574
OBID01000809
136244
Bacteroidota
TAC
Val
>WENV180283792
OBID01003164
127221
Bacteroidota
TAC
Val
>WENV180283570
OBID01000765
129970
Bacteroidota
TAC
Val
>WENV180285876
OBID01782313
103504
Bacteroidota
TAG
Leu
>WENV180283566
OBID01000760
96124
Bacteroidota
TAG
Leu
>WENV180285454
OBID01434075
96696
Bacteroidota
TAG
Leu
>WENV180283621
OBID01001137
268513
Bacteroidota
TCC
Gly
>WENV180285597
OBID01551471
200537
Bacteroidota
TCG
Arg
>WENV180285725
OBID01651990
146963
Bacteroidota
TCT
Arg
>WENV180283888
OBID01005465
147944
Bacteroidota
TCT
Arg
>WENV180284988
OBID01184038
45130
Bacteroidota
TGA
Ser
>WENV180286045
OBID01939327
148247
Bacteroidota
TGC
Ala
>WENV180284617
OBID01070772
128251
Bacteroidota
TGG
Pro
>WENV180283388
OBID01000005
146762
Bacteroidota
TGG
Pro
>WENV180283887
OBID01005465
128249
Bacteroidota
TGG
Pro
>WENV180284951
OBID01172656
145151
Bacteroidota
TGG
Pro
>WENV180284328
OBID01030017
150454
Bacteroidota
TGT
Thr
>WENV180283619
OBID01001137
147941
Bacteroidota
TGT
Thr
>WENV180283677
OBID01001605
340029
Bacteroidota
TTC
Glu
>WENV180285436
OBID01420512
347983
Bacteroidota
TTC
Glu
>WENV180285160
OBID01255929
340605
Bacteroidota
TTC
Glu
>WENV180284914
OBID01157856
354570
Bacteroidota
TTC
Glu
>WENV180283676
OBID01001605
340028
Bacteroidota
TTC
Glu
>WENV180284981
OBID01181437
415980
Bacteroidota
TTG
Gln
>WENV180285648
OBID01594768
415410
Bacteroidota
TTG
Gln
>WENV180284216
OBID01021336
239858
Bacteroidota
TTT
Lys
>WENV180283662
OBID01001449
238671
Bacteroidota
TTT
Lys
>WENV180283660
OBID01001449
238671
Bacteroidota
TTT
Lys
>WENV180285967
OBID01865187
236053
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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