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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180299071
OBJB01000004
132360
Bacteroidota
GGG
Pro
>WENV180299072
OBJB01000004
419272
Bacteroidota
CTG
Gln
>WENV180299073
OBJB01000004
16220
Bacteroidota
GGA
Ser
>WENV180299078
OBJB01000006
80607
Bacteroidota
GTA
Tyr
>WENV180299090
OBJB01000012
235207
Bacteroidota
CAT
Met
>WENV180299097
OBJB01000016
415410
Bacteroidota
TTG
Gln
>WENV180299105
OBJB01000020
95559
Bacteroidota
TAG
Leu
>WENV180299107
OBJB01000022
44852
Bacteroidota
TAA
Leu
>WENV180299109
OBJB01000022
80607
Bacteroidota
GTA
Tyr
>WENV180299112
OBJB01000022
144590
Bacteroidota
GTT
Asn
>WENV180299113
OBJB01000022
144590
Bacteroidota
GTT
Asn
>WENV180299118
OBJB01000030
338124
Bacteroidota
CCG
Arg
>WENV180299120
OBJB01000031
301449
Bacteroidota
CGG
Pro
>WENV180299121
OBJB01000032
193809
Bacteroidota
CAT
Met
>WENV180299140
OBJB01000058
338125
Bacteroidota
CCT
Arg
>WENV180299142
OBJB01000061
338132
Bacteroidota
GCA
Cys
>WENV180299165
OBJB01000094
144656
Bacteroidota
GTG
His
>WENV180299166
OBJB01000096
52358
Bacteroidota
TGA
Ser
>WENV180299174
OBJB01000106
52358
Bacteroidota
TGA
Ser
>WENV180299178
OBJB01000122
235102
Bacteroidota
CGT
Thr
>WENV180299179
OBJB01000123
144655
Bacteroidota
GGC
Ala
>WENV180299181
OBJB01000136
16224
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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