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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180339116
OBLI01002290
404226
Bacteroidota
CCT
Arg
>WENV180339807
OBLI01008437
175904
Bacteroidota
CGG
Pro
>WENV180338290
OBLI01000163
400161
Bacteroidota
GGT
Thr
>WENV180341030
OBLI01068372
400161
Bacteroidota
GGT
Thr
>WENV180341485
OBLI01137312
400161
Bacteroidota
GGT
Thr
>WENV180342120
OBLI01453809
400161
Bacteroidota
GGT
Thr
>WENV180338476
OBLI01000428
156422
Bacteroidota
TAC
Val
>WENV180338887
OBLI01001314
156422
Bacteroidota
TAC
Val
>WENV180338888
OBLI01001314
156422
Bacteroidota
TAC
Val
>WENV180340042
OBLI01012667
156422
Bacteroidota
TAC
Val
>WENV180338866
OBLI01001243
280553
Bacteroidota
TTT
Lys
>WENV180338326
OBLI01000207
282852
Bacteroidota
TTT
Lys
>WENV180338725
OBLI01000939
398871
Bacteroidota
TTC
Glu
>WENV180339071
OBLI01002032
322882
Bacteroidota
GCC
Gly
>WENV180339125
OBLI01002376
201819
Bacteroidota
CAT
Met
>WENV180339277
OBLI01003291
201819
Bacteroidota
CAT
Met
>WENV180338939
OBLI01001525
118221
Bacteroidota
CAA
Leu
>WENV180339377
OBLI01003775
118221
Bacteroidota
CAA
Leu
>WENV180339613
OBLI01006207
118221
Bacteroidota
CAA
Leu
>WENV180340678
OBLI01036592
118221
Bacteroidota
CAA
Leu
>WENV180340710
OBLI01039652
118221
Bacteroidota
CAA
Leu
>WENV180341854
OBLI01250080
352207
Bacteroidota
TCC
Gly
>WENV180339439
OBLI01004439
178571
Bacteroidota
GTT
Asn
>WENV180338671
OBLI01000783
280530
Bacteroidota
CCA
Trp
>WENV180338294
OBLI01000177
157895
Bacteroidota
TAC
Val
>WENV180338295
OBLI01000177
157895
Bacteroidota
TAC
Val
>WENV180338578
OBLI01000645
157895
Bacteroidota
TAC
Val
>WENV180339081
OBLI01002082
157895
Bacteroidota
TAC
Val
>WENV180339139
OBLI01002433
157895
Bacteroidota
TAC
Val
>WENV180339140
OBLI01002433
157895
Bacteroidota
TAC
Val
>WENV180339141
OBLI01002433
157895
Bacteroidota
TAC
Val
>WENV180338269
OBLI01000145
178907
Bacteroidota
TCT
Arg
>WENV180338196
OBLI01000079
56385
Bacteroidota
TGA
Ser
>WENV180338562
OBLI01000611
56385
Bacteroidota
TGA
Ser
>WENV180338563
OBLI01000611
56385
Bacteroidota
TGA
Ser
>WENV180338581
OBLI01000655
56385
Bacteroidota
TGA
Ser
>WENV180339211
OBLI01002833
56385
Bacteroidota
TGA
Ser
>WENV180339441
OBLI01004457
56385
Bacteroidota
TGA
Ser
>WENV180339982
OBLI01010974
56385
Bacteroidota
TGA
Ser
>WENV180340351
OBLI01021316
57645
Bacteroidota
TGA
Ser
>WENV180338516
OBLI01000487
20449
Bacteroidota
GGA
Ser
>WENV180342109
OBLI01450482
312035
Bacteroidota
CCA
Trp
>WENV180341877
OBLI01257900
178133
Bacteroidota
GAT
Ile
>WENV180338556
OBLI01000596
242241
Bacteroidota
GTC
Asp
>WENV180339153
OBLI01002511
242241
Bacteroidota
GTC
Asp
>WENV180339154
OBLI01002511
242241
Bacteroidota
GTC
Asp
>WENV180339155
OBLI01002513
242241
Bacteroidota
GTC
Asp
>WENV180339156
OBLI01002513
242241
Bacteroidota
GTC
Asp
>WENV180339232
OBLI01003000
242241
Bacteroidota
GTC
Asp
>WENV180339636
OBLI01006467
242241
Bacteroidota
GTC
Asp
>WENV180339650
OBLI01006696
242241
Bacteroidota
GTC
Asp
>WENV180339657
OBLI01006784
242241
Bacteroidota
GTC
Asp
>WENV180339840
OBLI01008942
242241
Bacteroidota
GTC
Asp
>WENV180340727
OBLI01040824
242241
Bacteroidota
GTC
Asp
>WENV180342139
OBLI01468385
242241
Bacteroidota
GTC
Asp
>WENV180338804
OBLI01001068
175944
Bacteroidota
CAT
Met
>WENV180339072
OBLI01002039
175944
Bacteroidota
CAT
Met
>WENV180339201
OBLI01002758
175944
Bacteroidota
CAT
Met
>WENV180339259
OBLI01003187
175944
Bacteroidota
CAT
Met
>WENV180339264
OBLI01003216
175944
Bacteroidota
CAT
Met
>WENV180341679
OBLI01194633
418894
Bacteroidota
TTC
Glu
>WENV180338370
OBLI01000262
399200
Bacteroidota
CAT
Met
>WENV180338490
OBLI01000457
399200
Bacteroidota
CAT
Met
>WENV180338518
OBLI01000487
156078
Bacteroidota
TAC
Val
>WENV180338654
OBLI01000767
404109
Bacteroidota
CTC
Glu
>WENV180338712
OBLI01000890
404109
Bacteroidota
CTC
Glu
>WENV180339014
OBLI01001792
404109
Bacteroidota
CTC
Glu
>WENV180339016
OBLI01001800
404109
Bacteroidota
CTC
Glu
>WENV180339175
OBLI01002606
404109
Bacteroidota
CTC
Glu
>WENV180339176
OBLI01002606
404109
Bacteroidota
CTC
Glu
>WENV180339813
OBLI01008613
404109
Bacteroidota
CTC
Glu
>WENV180339814
OBLI01008613
404109
Bacteroidota
CTC
Glu
>WENV180340074
OBLI01013494
404109
Bacteroidota
CTC
Glu
>WENV180340536
OBLI01028784
404109
Bacteroidota
CTC
Glu
>WENV180340610
OBLI01032759
404109
Bacteroidota
CTC
Glu
>WENV180341912
OBLI01276845
404109
Bacteroidota
CTC
Glu
>WENV180341974
OBLI01321766
404109
Bacteroidota
CTC
Glu
>WENV180341991
OBLI01336436
404109
Bacteroidota
CTC
Glu
>WENV180342129
OBLI01466572
404109
Bacteroidota
CTC
Glu
>WENV180342142
OBLI01469107
404109
Bacteroidota
CTC
Glu
>WENV180340451
OBLI01024777
46648
Bacteroidota
TAA
Leu
>WENV180338450
OBLI01000365
46648
Bacteroidota
TAA
Leu
>WENV180338531
OBLI01000518
46648
Bacteroidota
TAA
Leu
>WENV180338677
OBLI01000802
46648
Bacteroidota
TAA
Leu
>WENV180339468
OBLI01004765
46648
Bacteroidota
TAA
Leu
>WENV180339637
OBLI01006489
46648
Bacteroidota
TAA
Leu
>WENV180339980
OBLI01010961
46648
Bacteroidota
TAA
Leu
>WENV180342092
OBLI01448404
178179
Bacteroidota
GGC
Ala
>WENV180338625
OBLI01000698
118432
Bacteroidota
CAG
Leu
>WENV180339159
OBLI01002519
118432
Bacteroidota
CAG
Leu
>WENV180339596
OBLI01005988
280478
Bacteroidota
GCC
Gly
>WENV180339598
OBLI01005988
280478
Bacteroidota
GCC
Gly
>WENV180338879
OBLI01001284
284236
Bacteroidota
CGG
Pro
>WENV180339093
OBLI01002142
187400
Bacteroidota
GTT
Asn
>WENV180339094
OBLI01002142
187400
Bacteroidota
GTT
Asn
>WENV180339389
OBLI01003887
187400
Bacteroidota
GTT
Asn
>WENV180339588
OBLI01005933
187400
Bacteroidota
GTT
Asn
>WENV180340177
OBLI01016194
187400
Bacteroidota
GTT
Asn
>WENV180340373
OBLI01021862
187400
Bacteroidota
GTT
Asn
>WENV180342140
OBLI01468403
187400
Bacteroidota
GTT
Asn
>WENV180338455
OBLI01000386
178134
Bacteroidota
TGG
Pro
>WENV180338543
OBLI01000551
178134
Bacteroidota
TGG
Pro
>WENV180339036
OBLI01001881
178134
Bacteroidota
TGG
Pro
>WENV180339037
OBLI01001881
178134
Bacteroidota
TGG
Pro
>WENV180339045
OBLI01001953
178134
Bacteroidota
TGG
Pro
>WENV180339607
OBLI01006095
178134
Bacteroidota
TGG
Pro
>WENV180339122
OBLI01002345
158068
Bacteroidota
GGG
Pro
>WENV180340416
OBLI01023507
158068
Bacteroidota
GGG
Pro
>WENV180340498
OBLI01026975
158068
Bacteroidota
GGG
Pro
>WENV180342090
OBLI01443104
118220
Bacteroidota
GTA
Tyr
>WENV180338236
OBLI01000102
191205
Bacteroidota
TGG
Pro
>WENV180338237
OBLI01000102
191205
Bacteroidota
TGG
Pro
>WENV180338774
OBLI01001060
191205
Bacteroidota
TGG
Pro
>WENV180339599
OBLI01005988
74084
Bacteroidota
CAG
Leu
>WENV180338901
OBLI01001341
481328
Bacteroidota
TTG
Gln
>WENV180339084
OBLI01002087
481328
Bacteroidota
TTG
Gln
>WENV180338500
OBLI01000475
491385
Bacteroidota
TTG
Gln
>WENV180338990
OBLI01001644
491385
Bacteroidota
TTG
Gln
>WENV180339752
OBLI01007746
491385
Bacteroidota
TTG
Gln
>WENV180338670
OBLI01000783
400088
Bacteroidota
GGT
Thr
>WENV180338601
OBLI01000677
188555
Bacteroidota
CAT
Met
>WENV180340043
OBLI01012681
284456
Bacteroidota
CGG
Pro
>WENV180340549
OBLI01029427
156467
Bacteroidota
TGG
Pro
>WENV180339317
OBLI01003478
481045
Bacteroidota
CCC
Gly
>WENV180338519
OBLI01000489
398836
Bacteroidota
GCA
Cys
>WENV180338520
OBLI01000489
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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