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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180347092
OBLO01000005
480404
Bacteroidota
TTG
Gln
>WENV180347098
OBLO01000011
118221
Bacteroidota
CAA
Leu
>WENV180347109
OBLO01000013
176192
Bacteroidota
TCT
Arg
>WENV180347144
OBLO01000028
46648
Bacteroidota
TAA
Leu
>WENV180347146
OBLO01000028
481328
Bacteroidota
TTG
Gln
>WENV180347185
OBLO01000054
400161
Bacteroidota
GGT
Thr
>WENV180347186
OBLO01000054
312035
Bacteroidota
CCA
Trp
>WENV180347205
OBLO01000069
404109
Bacteroidota
CTC
Glu
>WENV180347206
OBLO01000069
404109
Bacteroidota
CTC
Glu
>WENV180347207
OBLO01000069
404109
Bacteroidota
CTC
Glu
>WENV180347214
OBLO01000076
20766
Bacteroidota
GGA
Ser
>WENV180347219
OBLO01000089
285360
Bacteroidota
TTT
Lys
>WENV180347242
OBLO01000115
56385
Bacteroidota
TGA
Ser
>WENV180347366
OBLO01000206
159415
Bacteroidota
TAC
Val
>WENV180347367
OBLO01000206
159415
Bacteroidota
TAC
Val
>WENV180347365
OBLO01000206
159415
Bacteroidota
TAC
Val
>WENV180347448
OBLO01000329
57807
Bacteroidota
TGA
Ser
>WENV180347478
OBLO01000399
398836
Bacteroidota
GCA
Cys
>WENV180347517
OBLO01000461
351598
Bacteroidota
CGG
Pro
>WENV180347526
OBLO01000488
404226
Bacteroidota
CCT
Arg
>WENV180347534
OBLO01000503
242241
Bacteroidota
GTC
Asp
>WENV180347535
OBLO01000503
242241
Bacteroidota
GTC
Asp
>WENV180347536
OBLO01000503
242241
Bacteroidota
GTC
Asp
>WENV180347537
OBLO01000503
242241
Bacteroidota
GTC
Asp
>WENV180347547
OBLO01000532
351598
Bacteroidota
CGG
Pro
>WENV180347559
OBLO01000558
57807
Bacteroidota
TGA
Ser
>WENV180347614
OBLO01000743
284456
Bacteroidota
CGG
Pro
>WENV180347647
OBLO01000851
481328
Bacteroidota
TTG
Gln
>WENV180347651
OBLO01000860
57807
Bacteroidota
TGA
Ser
>WENV180347668
OBLO01000882
46648
Bacteroidota
TAA
Leu
>WENV180347817
OBLO01001373
285360
Bacteroidota
TTT
Lys
>WENV180347856
OBLO01001543
398836
Bacteroidota
GCA
Cys
>WENV180347898
OBLO01001794
398829
Bacteroidota
CCT
Arg
>WENV180347906
OBLO01001824
484496
Bacteroidota
TTG
Gln
>WENV180347955
OBLO01002069
398860
Bacteroidota
CTC
Glu
>WENV180347977
OBLO01002201
201819
Bacteroidota
CAT
Met
>WENV180347980
OBLO01002207
117741
Bacteroidota
TAG
Leu
>WENV180348077
OBLO01002822
332896
Bacteroidota
TTT
Lys
>WENV180348148
OBLO01003326
99847
Bacteroidota
GTA
Tyr
>WENV180348248
OBLO01004194
158068
Bacteroidota
GGG
Pro
>WENV180348385
OBLO01005405
484496
Bacteroidota
TTG
Gln
>WENV180348414
OBLO01005690
400815
Bacteroidota
TTC
Glu
>WENV180348439
OBLO01006171
480325
Bacteroidota
CTG
Gln
>WENV180348440
OBLO01006171
480325
Bacteroidota
CTG
Gln
>WENV180348447
OBLO01006249
280451
Bacteroidota
CGT
Thr
>WENV180348511
OBLO01007055
280557
Bacteroidota
CAT
Met
>WENV180348513
OBLO01007138
404226
Bacteroidota
CCT
Arg
>WENV180348514
OBLO01007138
398871
Bacteroidota
TTC
Glu
>WENV180348515
OBLO01007138
398871
Bacteroidota
TTC
Glu
>WENV180348562
OBLO01007763
175906
Bacteroidota
GTG
His
>WENV180348563
OBLO01007763
175906
Bacteroidota
GTG
His
>WENV180348605
OBLO01008558
332896
Bacteroidota
TTT
Lys
>WENV180348606
OBLO01008578
398828
Bacteroidota
CCG
Arg
>WENV180348614
OBLO01008699
399200
Bacteroidota
CAT
Met
>WENV180348641
OBLO01008979
118089
Bacteroidota
TAG
Leu
>WENV180348651
OBLO01009370
285750
Bacteroidota
CCC
Gly
>WENV180348652
OBLO01009378
57807
Bacteroidota
TGA
Ser
>WENV180348665
OBLO01009706
175844
Bacteroidota
GGC
Ala
>WENV180348688
OBLO01010048
175903
Bacteroidota
GTG
His
>WENV180348694
OBLO01010187
178572
Bacteroidota
CAT
Met
>WENV180348697
OBLO01010293
398829
Bacteroidota
CCT
Arg
>WENV180348764
OBLO01011620
147839
Bacteroidota
CAG
Leu
>WENV180348762
OBLO01011620
178134
Bacteroidota
TGG
Pro
>WENV180348781
OBLO01012099
20449
Bacteroidota
GGA
Ser
>WENV180348799
OBLO01012623
175904
Bacteroidota
CGG
Pro
>WENV180348800
OBLO01012623
280530
Bacteroidota
CCA
Trp
>WENV180348866
OBLO01014512
29791
Bacteroidota
GCT
Ser
>WENV180348867
OBLO01014512
398860
Bacteroidota
CTC
Glu
>WENV180348892
OBLO01015213
280446
Bacteroidota
TTT
Lys
>WENV180348902
OBLO01015293
280446
Bacteroidota
TTT
Lys
>WENV180348922
OBLO01015972
481045
Bacteroidota
CCC
Gly
>WENV180348962
OBLO01017512
57807
Bacteroidota
TGA
Ser
>WENV180349008
OBLO01018668
57807
Bacteroidota
TGA
Ser
>WENV180349024
OBLO01019309
280478
Bacteroidota
GCC
Gly
>WENV180349070
OBLO01021823
280530
Bacteroidota
CCA
Trp
>WENV180349078
OBLO01022000
175902
Bacteroidota
GGC
Ala
>WENV180349136
OBLO01023773
158068
Bacteroidota
GGG
Pro
>WENV180349162
OBLO01025475
280446
Bacteroidota
TTT
Lys
>WENV180349165
OBLO01025544
156383
Bacteroidota
GGG
Pro
>WENV180349216
OBLO01028425
178907
Bacteroidota
TCT
Arg
>WENV180349322
OBLO01034514
399200
Bacteroidota
CAT
Met
>WENV180349335
OBLO01035296
175944
Bacteroidota
CAT
Met
>WENV180349364
OBLO01038097
56072
Bacteroidota
TAA
Leu
>WENV180349413
OBLO01042470
284456
Bacteroidota
CGG
Pro
>WENV180349546
OBLO01058164
30327
Bacteroidota
GCT
Ser
>WENV180349545
OBLO01058164
118220
Bacteroidota
GTA
Tyr
>WENV180349607
OBLO01069296
400949
Bacteroidota
CCT
Arg
>WENV180349636
OBLO01076974
99847
Bacteroidota
GTA
Tyr
>WENV180349800
OBLO01122155
481044
Bacteroidota
>WENV180349871
OBLO01159971
118433
Bacteroidota
TAG
Leu
>WENV180350068
OBLO01248901
118220
Bacteroidota
GTA
Tyr
>WENV180350080
OBLO01250268
488746
Bacteroidota
CTG
Gln
>WENV180350163
OBLO01265676
118220
Bacteroidota
GTA
Tyr
>WENV180350207
OBLO01291123
175838
Bacteroidota
GTT
Asn
>WENV180350223
OBLO01293752
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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