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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180381515
OBOS01000639
227539
Bacteroidota
GTT
Asn
>WENV180381629
OBOS01005495
372872
Bacteroidota
TCC
Gly
>WENV180381652
OBOS01006812
340026
Bacteroidota
CAT
Met
>WENV180381705
OBOS01011145
361792
Bacteroidota
GAA
Phe
>WENV180381764
OBOS01018426
400818
Bacteroidota
TTC
Glu
>WENV180381789
OBOS01023435
197494
Bacteroidota
GTC
Asp
>WENV180381791
OBOS01023492
73133
Bacteroidota
TAA
Leu
>WENV180381794
OBOS01023538
364431
Bacteroidota
TCC
Gly
>WENV180381806
OBOS01024909
130793
Bacteroidota
TAG
Leu
>WENV180381828
OBOS01028500
281538
Bacteroidota
GAA
Phe
>WENV180381833
OBOS01028644
56162
Bacteroidota
TGA
Ser
>WENV180381911
OBOS01045782
156076
Bacteroidota
TAC
Val
>WENV180381982
OBOS01062505
117927
Bacteroidota
TAG
Leu
>WENV180382020
OBOS01075517
176817
Bacteroidota
CAT
Met
>WENV180382054
OBOS01090280
56363
Bacteroidota
TGA
Ser
>WENV180382066
OBOS01098652
156605
Bacteroidota
GAC
Val
>WENV180382268
OBOS01182798
183480
Bacteroidota
TGC
Ala
>WENV180382269
OBOS01182905
233847
Bacteroidota
TGC
Ala
>WENV180382285
OBOS01191241
155808
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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