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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180397681
OBPZ01000103
155786
Bacteroidota
TGG
Pro
>WENV180397682
OBPZ01000103
155786
Bacteroidota
TGG
Pro
>WENV180397680
OBPZ01000103
74253
Bacteroidota
GCT
Ser
>WENV180397713
OBPZ01000842
177901
Bacteroidota
GTT
Asn
>WENV180397725
OBPZ01001227
402532
Bacteroidota
GCC
Gly
>WENV180397759
OBPZ01003925
193718
Bacteroidota
GTC
Asp
>WENV180397770
OBPZ01004976
372845
Bacteroidota
CCA
Trp
>WENV180397778
OBPZ01006299
340026
Bacteroidota
CAT
Met
>WENV180397781
OBPZ01006940
176817
Bacteroidota
CAT
Met
>WENV180397786
OBPZ01007815
281190
Bacteroidota
CAT
Met
>WENV180397792
OBPZ01008950
483389
Bacteroidota
GCA
Cys
>WENV180397805
OBPZ01010743
402390
Bacteroidota
TTC
Glu
>WENV180397843
OBPZ01014996
206043
Bacteroidota
GTC
Asp
>WENV180397848
OBPZ01015564
172063
Bacteroidota
TAC
Val
>WENV180397863
OBPZ01017671
366169
Bacteroidota
GAA
Phe
>WENV180397882
OBPZ01020076
155808
Bacteroidota
TGG
Pro
>WENV180397917
OBPZ01025028
460957
Bacteroidota
GCC
Gly
>WENV180397932
OBPZ01028565
402090
Bacteroidota
TTG
Gln
>WENV180397953
OBPZ01033077
399285
Bacteroidota
TTC
Glu
>WENV180397990
OBPZ01043317
281336
Bacteroidota
TCC
Gly
>WENV180398020
OBPZ01053252
57150
Bacteroidota
TAA
Leu
>WENV180398031
OBPZ01057473
63365
Bacteroidota
TGA
Ser
>WENV180398077
OBPZ01070543
400818
Bacteroidota
TTC
Glu
>WENV180398122
OBPZ01085148
176707
Bacteroidota
TCT
Arg
>WENV180398124
OBPZ01087460
399343
Bacteroidota
TTC
Glu
>WENV180398128
OBPZ01088983
402343
Bacteroidota
CCA
Trp
>WENV180398130
OBPZ01089602
156605
Bacteroidota
GAC
Val
>WENV180398156
OBPZ01102163
73133
Bacteroidota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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