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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180433553
OBWK01000001
398829
Bacteroidota
CCT
Arg
>WENV180433551
OBWK01000001
175838
Bacteroidota
GTT
Asn
>WENV180433552
OBWK01000001
175838
Bacteroidota
GTT
Asn
>WENV180433546
OBWK01000001
56072
Bacteroidota
TAA
Leu
>WENV180433548
OBWK01000001
99847
Bacteroidota
GTA
Tyr
>WENV180433560
OBWK01000002
99847
Bacteroidota
GTA
Tyr
>WENV180433555
OBWK01000002
280446
Bacteroidota
TTT
Lys
>WENV180433557
OBWK01000002
398836
Bacteroidota
GCA
Cys
>WENV180433565
OBWK01000004
480404
Bacteroidota
TTG
Gln
>WENV180433581
OBWK01000010
280451
Bacteroidota
CGT
Thr
>WENV180433585
OBWK01000011
175903
Bacteroidota
GTG
His
>WENV180433584
OBWK01000011
69204
Bacteroidota
TGA
Ser
>WENV180433588
OBWK01000012
285360
Bacteroidota
TTT
Lys
>WENV180433590
OBWK01000012
398860
Bacteroidota
CTC
Glu
>WENV180433591
OBWK01000014
398828
Bacteroidota
CCG
Arg
>WENV180433595
OBWK01000016
140771
Bacteroidota
>WENV180433598
OBWK01000016
140771
Bacteroidota
>WENV180433603
OBWK01000018
398829
Bacteroidota
CCT
Arg
>WENV180433605
OBWK01000019
484496
Bacteroidota
TTG
Gln
>WENV180433610
OBWK01000021
172207
Bacteroidota
GGG
Pro
>WENV180433609
OBWK01000021
20206
Bacteroidota
GGA
Ser
>WENV180433608
OBWK01000021
488746
Bacteroidota
CTG
Gln
>WENV180433614
OBWK01000025
201819
Bacteroidota
CAT
Met
>WENV180433621
OBWK01000038
351598
Bacteroidota
CGG
Pro
>WENV180433631
OBWK01000046
175902
Bacteroidota
GGC
Ala
>WENV180433645
OBWK01000057
159415
Bacteroidota
TAC
Val
>WENV180433646
OBWK01000057
159415
Bacteroidota
TAC
Val
>WENV180433652
OBWK01000067
176192
Bacteroidota
TCT
Arg
>WENV180433662
OBWK01000071
69204
Bacteroidota
TGA
Ser
>WENV180433684
OBWK01000105
56493
Bacteroidota
TGA
Ser
>WENV180433685
OBWK01000105
27524
Bacteroidota
GGA
Ser
>WENV180433687
OBWK01000107
117741
Bacteroidota
TAG
Leu
>WENV180433727
OBWK01000186
285360
Bacteroidota
TTT
Lys
>WENV180433808
OBWK01000336
398836
Bacteroidota
GCA
Cys
>WENV180433817
OBWK01000378
280557
Bacteroidota
CAT
Met
>WENV180433835
OBWK01000424
69204
Bacteroidota
TGA
Ser
>WENV180433917
OBWK01001018
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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