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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180437675
OBWQ01000001
57807
Bacteroidota
TGA
Ser
>WENV180437676
OBWQ01000001
398836
Bacteroidota
GCA
Cys
>WENV180437673
OBWQ01000001
322836
Bacteroidota
CGT
Thr
>WENV180437677
OBWQ01000002
20766
Bacteroidota
GGA
Ser
>WENV180437679
OBWQ01000003
117804
Bacteroidota
TAG
Leu
>WENV180437686
OBWQ01000005
398829
Bacteroidota
CCT
Arg
>WENV180437691
OBWQ01000007
480318
Bacteroidota
CTG
Gln
>WENV180437690
OBWQ01000007
158068
Bacteroidota
GGG
Pro
>WENV180437694
OBWQ01000008
73057
Bacteroidota
GAG
Leu
>WENV180437698
OBWQ01000008
280532
Bacteroidota
>WENV180437699
OBWQ01000009
175903
Bacteroidota
GTG
His
>WENV180437703
OBWQ01000010
176192
Bacteroidota
TCT
Arg
>WENV180437705
OBWQ01000011
280557
Bacteroidota
CAT
Met
>WENV180437707
OBWQ01000012
158068
Bacteroidota
GGG
Pro
>WENV180437708
OBWQ01000012
280446
Bacteroidota
TTT
Lys
>WENV180437711
OBWQ01000013
400161
Bacteroidota
GGT
Thr
>WENV180437712
OBWQ01000013
312035
Bacteroidota
CCA
Trp
>WENV180437714
OBWQ01000014
201819
Bacteroidota
CAT
Met
>WENV180437716
OBWQ01000015
99847
Bacteroidota
GTA
Tyr
>WENV180437719
OBWQ01000016
399026
Bacteroidota
CCT
Arg
>WENV180437723
OBWQ01000019
398828
Bacteroidota
CCG
Arg
>WENV180437727
OBWQ01000021
398860
Bacteroidota
CTC
Glu
>WENV180437728
OBWQ01000022
480404
Bacteroidota
TTG
Gln
>WENV180437736
OBWQ01000028
398836
Bacteroidota
GCA
Cys
>WENV180437750
OBWQ01000035
46648
Bacteroidota
TAA
Leu
>WENV180437752
OBWQ01000035
481328
Bacteroidota
TTG
Gln
>WENV180437753
OBWQ01000037
57807
Bacteroidota
TGA
Ser
>WENV180437755
OBWQ01000038
280451
Bacteroidota
CGT
Thr
>WENV180437766
OBWQ01000046
484496
Bacteroidota
TTG
Gln
>WENV180437767
OBWQ01000051
175936
Bacteroidota
CAT
Met
>WENV180437774
OBWQ01000054
175838
Bacteroidota
GTT
Asn
>WENV180437775
OBWQ01000054
175838
Bacteroidota
GTT
Asn
>WENV180437773
OBWQ01000054
56072
Bacteroidota
TAA
Leu
>WENV180437792
OBWQ01000061
156422
Bacteroidota
TAC
Val
>WENV180437796
OBWQ01000064
56385
Bacteroidota
TGA
Ser
>WENV180437801
OBWQ01000066
99847
Bacteroidota
GTA
Tyr
>WENV180437802
OBWQ01000068
280446
Bacteroidota
TTT
Lys
>WENV180437811
OBWQ01000070
140771
Bacteroidota
>WENV180437814
OBWQ01000070
140771
Bacteroidota
>WENV180437816
OBWQ01000072
322882
Bacteroidota
GCC
Gly
>WENV180437837
OBWQ01000080
187814
Bacteroidota
GTC
Asp
>WENV180437838
OBWQ01000080
187814
Bacteroidota
GTC
Asp
>WENV180437839
OBWQ01000080
187814
Bacteroidota
GTC
Asp
>WENV180437840
OBWQ01000083
57807
Bacteroidota
TGA
Ser
>WENV180437842
OBWQ01000088
20206
Bacteroidota
GGA
Ser
>WENV180437861
OBWQ01000110
118221
Bacteroidota
CAA
Leu
>WENV180437864
OBWQ01000111
280557
Bacteroidota
CAT
Met
>WENV180437879
OBWQ01000119
99847
Bacteroidota
GTA
Tyr
>WENV180437883
OBWQ01000122
404109
Bacteroidota
CTC
Glu
>WENV180437884
OBWQ01000122
404109
Bacteroidota
CTC
Glu
>WENV180437885
OBWQ01000123
488746
Bacteroidota
CTG
Gln
>WENV180437893
OBWQ01000135
117741
Bacteroidota
TAG
Leu
>WENV180437953
OBWQ01000253
56493
Bacteroidota
TGA
Ser
>WENV180437973
OBWQ01000324
175902
Bacteroidota
GGC
Ala
>WENV180438181
OBWQ01012808
56493
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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