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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180560942
OCKX01000010
280557
Bacteroidota
CAT
Met
>WENV180560943
OCKX01000013
365112
Bacteroidota
TTT
Lys
>WENV180560952
OCKX01000079
182267
Bacteroidota
GTT
Asn
>WENV180560954
OCKX01000090
56072
Bacteroidota
TAA
Leu
>WENV180560972
OCKX01000119
398836
Bacteroidota
GCA
Cys
>WENV180560985
OCKX01000400
140771
Bacteroidota
>WENV180560990
OCKX01000577
484496
Bacteroidota
TTG
Gln
>WENV180560994
OCKX01000621
56072
Bacteroidota
TAA
Leu
>WENV180561001
OCKX01000960
404226
Bacteroidota
CCT
Arg
>WENV180561013
OCKX01001308
398829
Bacteroidota
CCT
Arg
>WENV180561014
OCKX01001384
351598
Bacteroidota
CGG
Pro
>WENV180561028
OCKX01002340
57807
Bacteroidota
TGA
Ser
>WENV180561059
OCKX01004475
398828
Bacteroidota
CCG
Arg
>WENV180561060
OCKX01004510
158068
Bacteroidota
GGG
Pro
>WENV180561082
OCKX01006659
280446
Bacteroidota
TTT
Lys
>WENV180561098
OCKX01008564
117741
Bacteroidota
TAG
Leu
>WENV180561131
OCKX01014321
280451
Bacteroidota
CGT
Thr
>WENV180561176
OCKX01027577
178133
Bacteroidota
GAT
Ile
>WENV180561240
OCKX01066584
186874
Bacteroidota
CAT
Met
>WENV180561256
OCKX01075936
201819
Bacteroidota
CAT
Met
>WENV180561262
OCKX01082566
140771
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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