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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180633362
OCRA01001383
140771
Bacteroidota
>WENV180633824
OCRA01070419
140771
Bacteroidota
>WENV180633366
OCRA01001748
74084
Bacteroidota
CAG
Leu
>WENV180634004
OCRA01136641
280557
Bacteroidota
CAT
Met
>WENV180633346
OCRA01000351
201819
Bacteroidota
CAT
Met
>WENV180633432
OCRA01006140
399200
Bacteroidota
CAT
Met
>WENV180633391
OCRA01003391
398829
Bacteroidota
CCT
Arg
>WENV180633368
OCRA01001834
351598
Bacteroidota
CGG
Pro
>WENV180633431
OCRA01006105
351598
Bacteroidota
CGG
Pro
>WENV180633744
OCRA01054273
351598
Bacteroidota
CGG
Pro
>WENV180633417
OCRA01005221
280451
Bacteroidota
CGT
Thr
>WENV180633994
OCRA01129084
398860
Bacteroidota
CTC
Glu
>WENV180634160
OCRA01240671
488746
Bacteroidota
CTG
Gln
>WENV180634207
OCRA01274801
480325
Bacteroidota
CTG
Gln
>WENV180633360
OCRA01001364
73057
Bacteroidota
GAG
Leu
>WENV180634205
OCRA01272872
398836
Bacteroidota
GCA
Cys
>WENV180634069
OCRA01166675
280478
Bacteroidota
GCC
Gly
>WENV180634223
OCRA01280069
280478
Bacteroidota
GCC
Gly
>WENV180634147
OCRA01228999
29791
Bacteroidota
GCT
Ser
>WENV180633339
OCRA01000174
20206
Bacteroidota
GGA
Ser
>WENV180633416
OCRA01005206
20449
Bacteroidota
GGA
Ser
>WENV180633338
OCRA01000105
27502
Bacteroidota
GGA
Ser
>WENV180633345
OCRA01000320
27502
Bacteroidota
GGA
Ser
>WENV180633342
OCRA01000179
400088
Bacteroidota
GGT
Thr
>WENV180633327
OCRA01000002
99847
Bacteroidota
GTA
Tyr
>WENV180633462
OCRA01010828
99847
Bacteroidota
GTA
Tyr
>WENV180634220
OCRA01279759
203954
Bacteroidota
GTC
Asp
>WENV180634088
OCRA01179013
175906
Bacteroidota
GTG
His
>WENV180633783
OCRA01061815
175903
Bacteroidota
GTG
His
>WENV180633958
OCRA01115324
56072
Bacteroidota
TAA
Leu
>WENV180633350
OCRA01000506
117741
Bacteroidota
TAG
Leu
>WENV180634144
OCRA01226753
117804
Bacteroidota
TAG
Leu
>WENV180633954
OCRA01113954
56493
Bacteroidota
TGA
Ser
>WENV180634250
OCRA01389275
69204
Bacteroidota
TGA
Ser
>WENV180633734
OCRA01053940
398871
Bacteroidota
TTC
Glu
>WENV180634211
OCRA01276927
480404
Bacteroidota
TTG
Gln
>WENV180633428
OCRA01005560
484496
Bacteroidota
TTG
Gln
>WENV180633433
OCRA01006275
365112
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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