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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180638560
OCRI01001627
118749
Bacteroidota
GTA
Tyr
>WENV180638562
OCRI01001627
408604
Bacteroidota
GGT
Thr
>WENV180638619
OCRI01003716
320669
Bacteroidota
GAA
Phe
>WENV180638728
OCRI01010456
156605
Bacteroidota
GAC
Val
>WENV180638737
OCRI01012051
140868
Bacteroidota
GTA
Tyr
>WENV180638755
OCRI01015094
402390
Bacteroidota
TTC
Glu
>WENV180638770
OCRI01017529
402090
Bacteroidota
TTG
Gln
>WENV180638794
OCRI01020533
400818
Bacteroidota
TTC
Glu
>WENV180638845
OCRI01030317
227539
Bacteroidota
GTT
Asn
>WENV180638870
OCRI01036482
402532
Bacteroidota
GCC
Gly
>WENV180638904
OCRI01044586
344563
Bacteroidota
TTG
Gln
>WENV180638948
OCRI01059376
130793
Bacteroidota
TAG
Leu
>WENV180638959
OCRI01062423
399343
Bacteroidota
TTC
Glu
>WENV180639070
OCRI01109216
281190
Bacteroidota
CAT
Met
>WENV180639178
OCRI01171530
289409
Bacteroidota
TCC
Gly
>WENV180639183
OCRI01172659
120026
Bacteroidota
GTA
Tyr
>WENV180639190
OCRI01175818
281336
Bacteroidota
TCC
Gly
>WENV180639192
OCRI01176594
235895
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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